RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 PCNTO95613 3336 aa16.48■□□□□ 0.23
C11orf53-202ENST00000635886 GAKO14976 1311 aa16.48■□□□□ 0.23
C11orf53-202ENST00000635886 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
C11orf53-202ENST00000635886 MECOMQ03112 1051 aa16.48■□□□□ 0.23
C11orf53-202ENST00000635886 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
C11orf53-202ENST00000635886 ZNF384Q8TF68 577 aa16.48■□□□□ 0.23
C11orf53-202ENST00000635886 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
C11orf53-202ENST00000635886 KIF23Q02241 960 aaPredicted RBP16.47■□□□□ 0.23
C11orf53-202ENST00000635886 MAP3K11Q16584 847 aa16.47■□□□□ 0.23
C11orf53-202ENST00000635886 FAM83AQ86UY5 434 aa16.47■□□□□ 0.23
C11orf53-202ENST00000635886 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
C11orf53-202ENST00000635886 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
C11orf53-202ENST00000635886 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
C11orf53-202ENST00000635886 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
C11orf53-202ENST00000635886 USP2O75604 605 aaPredicted RBP16.46■□□□□ 0.23
C11orf53-202ENST00000635886 CTCFP49711 727 aaPredicted RBP16.46■□□□□ 0.23
C11orf53-202ENST00000635886 NFIAQ12857 509 aa16.46■□□□□ 0.23
C11orf53-202ENST00000635886 SLF2Q8IX21 1173 aa16.46■□□□□ 0.23
C11orf53-202ENST00000635886 NSUN4Q96CB9 384 aaKnown RBP16.46■□□□□ 0.23
C11orf53-202ENST00000635886 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
C11orf53-202ENST00000635886 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
C11orf53-202ENST00000635886 MYH2Q9UKX2 1941 aa16.46■□□□□ 0.23
C11orf53-202ENST00000635886 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
C11orf53-202ENST00000635886 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
C11orf53-202ENST00000635886 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
C11orf53-202ENST00000635886 BTDP43251 543 aa16.45■□□□□ 0.22
C11orf53-202ENST00000635886 ZAP70P43403 619 aa16.45■□□□□ 0.22
C11orf53-202ENST00000635886 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
C11orf53-202ENST00000635886 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
C11orf53-202ENST00000635886 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
C11orf53-202ENST00000635886 RPAP1Q9BWH6 1393 aaPredicted RBP16.44■□□□□ 0.22
C11orf53-202ENST00000635886 HSPA8P11142 646 aaKnown RBP16.44■□□□□ 0.22
C11orf53-202ENST00000635886 IREB2P48200 963 aaKnown RBP16.44■□□□□ 0.22
C11orf53-202ENST00000635886 GSTO1P78417 241 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 TCP10Q12799 353 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
C11orf53-202ENST00000635886 FAM151AQ8WW52 585 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 CLMNQ96JQ2 1002 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 CSRNP1Q96S65 589 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 CRBNQ96SW2 442 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.44■□□□□ 0.22
C11orf53-202ENST00000635886 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
C11orf53-202ENST00000635886 GPR75-ASB3A0A0A6YYF3 556 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 LDHCP07864 332 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 LBX1P52954 281 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
C11orf53-202ENST00000635886 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
C11orf53-202ENST00000635886 TSKSQ9UJT2 592 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
C11orf53-202ENST00000635886 RFX7Q2KHR2 1363 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
C11orf53-202ENST00000635886 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
C11orf53-202ENST00000635886 RGS3P49796 1198 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 ZFPM1Q8IX07 1006 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 IDI2Q9BXS1 227 aa16.42■□□□□ 0.22
C11orf53-202ENST00000635886 CA12O43570 354 aa16.41■□□□□ 0.22
C11orf53-202ENST00000635886 RHBDL3P58872 404 aa16.41■□□□□ 0.22
C11orf53-202ENST00000635886 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
C11orf53-202ENST00000635886 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
C11orf53-202ENST00000635886 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
C11orf53-202ENST00000635886 PRDM10Q9NQV6 1147 aa16.41■□□□□ 0.22
C11orf53-202ENST00000635886 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
C11orf53-202ENST00000635886 ENTPD3O75355 529 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
C11orf53-202ENST00000635886 MIGA2Q7L4E1 593 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
C11orf53-202ENST00000635886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.4■□□□□ 0.22
C11orf53-202ENST00000635886 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 WNK4Q96J92 1243 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
C11orf53-202ENST00000635886 OTOFQ9HC10 1997 aa16.4■□□□□ 0.22
C11orf53-202ENST00000635886 MAST2Q6P0Q8 1798 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
C11orf53-202ENST00000635886 PICALMQ13492 652 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 VGLL4Q14135 290 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 DCAF15Q66K64 600 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 ELP3Q9H9T3 547 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
C11orf53-202ENST00000635886 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
C11orf53-202ENST00000635886 IGSF3O75054 1194 aa16.38■□□□□ 0.21
C11orf53-202ENST00000635886 MAP4K4O95819 1239 aaPredicted RBP16.38■□□□□ 0.21
C11orf53-202ENST00000635886 ZBTB48P10074 688 aaPredicted RBP16.38■□□□□ 0.21
C11orf53-202ENST00000635886 GJA5P36382 358 aa16.38■□□□□ 0.21
C11orf53-202ENST00000635886 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
C11orf53-202ENST00000635886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
C11orf53-202ENST00000635886 WRNIP1Q96S55 665 aa16.38■□□□□ 0.21
C11orf53-202ENST00000635886 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
C11orf53-202ENST00000635886 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
C11orf53-202ENST00000635886 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
C11orf53-202ENST00000635886 TRPA1O75762 1119 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 TM4SF4P48230 202 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms