RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 MEIS3Q99687 375 aa12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 USP40Q9NVE5 1235 aa12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
RHOXF1P3-201ENST00000635058 TCP10Q12799 353 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 GORABQ5T7V8 394 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CD99L2Q8TCZ2 262 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SALL1Q9NSC2 1324 aa12.36□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PRDX5P30044 214 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PHKA1P46020 1223 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 TIMM10P62072 90 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PPATQ06203 517 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 MVPQ14764 893 aaKnown RBP12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 KIF22Q14807 665 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CCDC102BQ68D86 513 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZCCHC17Q9NP64 241 aaKnown RBP12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PTPN22Q9Y2R2 807 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 DAGLAQ9Y4D2 1042 aa12.35□□□□□ -0.43
RHOXF1P3-201ENST00000635058 IRF6O14896 467 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 ZBTB22O15209 634 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 GNAI2P04899 355 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 PPIL2Q13356 520 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 NBPF11Q86T75 865 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 DZIP1Q86YF9 867 aaKnown RBP12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 NEUROD6Q96NK8 337 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 SNCAIPQ9Y6H5 919 aa12.34□□□□□ -0.43
RHOXF1P3-201ENST00000635058 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 A0A1B0GUL7 405 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 TFCP2Q12800 502 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 MTX1Q13505 466 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ATF7IPQ6VMQ6 1270 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
RHOXF1P3-201ENST00000635058 BTBD19C9JJ37 291 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 TLR2O60603 784 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ENTPD3O75355 529 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ADORA1P30542 326 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 NFIAQ12857 509 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ERICH6Q7L0X2 663 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 PICK1Q9NRD5 415 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
RHOXF1P3-201ENST00000635058 BCAR3O75815 825 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 GNRH1P01148 92 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 LDHCP07864 332 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 TRIM27P14373 513 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 INPP5BP32019 993 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 GSTO1P78417 241 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 IDI2Q9BXS1 227 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ECM29Q5VYK3 1845 aa12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
RHOXF1P3-201ENST00000635058 CXCL11O14625 94 aa12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 RGS3P49796 1198 aa12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 SLC9C1Q4G0N8 1177 aa12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 NOL9Q5SY16 702 aaKnown RBP12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ZKSCAN2Q63HK3 967 aa12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ANKRD23Q86SG2 305 aa12.3□□□□□ -0.44
RHOXF1P3-201ENST00000635058 MAP4K4O95819 1239 aaPredicted RBP12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 HOXD10P28358 340 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 BTDP43251 543 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 PRMT2P55345 433 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 FTSJ3Q8IY81 847 aaKnown RBP12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 SPATA5Q8NB90 893 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 NOL10Q9BSC4 688 aaKnown RBP12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 GAKO14976 1311 aa12.29□□□□□ -0.44
RHOXF1P3-201ENST00000635058 PDHXO00330 501 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 LACTBP83111 547 aaPredicted RBP12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 HNRNPUQ00839 825 aaKnown RBP eCLIP12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 MECOMQ03112 1051 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 PICALMQ13492 652 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 SLC4A8Q2Y0W8 1093 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 CCDC158Q5M9N0 1113 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 RAI14Q9P0K7 980 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 LRP2BPQ9P2M1 347 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 ZHX2Q9Y6X8 837 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 MROH7-TTC4A0A0A0MT08 1334 aa12.28□□□□□ -0.44
RHOXF1P3-201ENST00000635058 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms