RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PTCH2Q9Y6C5 1203 aa19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 SNCAIPQ9Y6H5 919 aa19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 KIF22Q14807 665 aa19.37■□□□□ 0.69
SNRNP48-203ENST00000634363 SLC4A8Q2Y0W8 1093 aa19.37■□□□□ 0.69
SNRNP48-203ENST00000634363 FAM83AQ86UY5 434 aa19.37■□□□□ 0.69
SNRNP48-203ENST00000634363 KIAA0100Q14667 2235 aaKnown RBP19.37■□□□□ 0.69
SNRNP48-203ENST00000634363 MYH13Q9UKX3 1938 aa19.37■□□□□ 0.69
SNRNP48-203ENST00000634363 BTBD19C9JJ37 291 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 IRF6O14896 467 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 SLC5A1P13866 664 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 FGFR2P21802 821 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 TCP10Q12799 353 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 SNAPC2Q13487 334 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 HHIPL2Q6UWX4 724 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 SUGT1Q9Y2Z0 365 aa19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 RBBP6Q7Z6E9 1792 aaKnown RBP19.36■□□□□ 0.69
SNRNP48-203ENST00000634363 EYA2O00167 538 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 TLR2O60603 784 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 FKBP1CQ5VVH2 108 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 ATF7IPQ6VMQ6 1270 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 WDR66Q8TBY9 1149 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 ZNF341Q9BYN7 854 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 ARHGAP39Q9C0H5 1083 aa19.35■□□□□ 0.69
SNRNP48-203ENST00000634363 TRIM27P14373 513 aa19.34■□□□□ 0.69
SNRNP48-203ENST00000634363 INPP5BP32019 993 aa19.34■□□□□ 0.69
SNRNP48-203ENST00000634363 PPIL2Q13356 520 aa19.34■□□□□ 0.69
SNRNP48-203ENST00000634363 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.34■□□□□ 0.69
SNRNP48-203ENST00000634363 LPIN2Q92539 896 aa19.34■□□□□ 0.69
SNRNP48-203ENST00000634363 SIL1Q9H173 461 aa19.34■□□□□ 0.69
SNRNP48-203ENST00000634363 ZSWIM8A7E2V4 1837 aa19.33■□□□□ 0.69
SNRNP48-203ENST00000634363 LACTBP83111 547 aaPredicted RBP19.33■□□□□ 0.68
SNRNP48-203ENST00000634363 HABP4Q5JVS0 413 aaKnown RBP19.33■□□□□ 0.68
SNRNP48-203ENST00000634363 SH3TC2Q8TF17 1288 aa19.33■□□□□ 0.68
SNRNP48-203ENST00000634363 RFX5P48382 616 aaPredicted RBP19.32■□□□□ 0.68
SNRNP48-203ENST00000634363 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
SNRNP48-203ENST00000634363 FAM151AQ8WW52 585 aa19.32■□□□□ 0.68
SNRNP48-203ENST00000634363 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
SNRNP48-203ENST00000634363 PPATQ06203 517 aa19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 CDC42EP5Q6NZY7 148 aa19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 CEP126Q9P2H0 1117 aa19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 CPA4Q9UI42 421 aa19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 DAGLAQ9Y4D2 1042 aa19.31■□□□□ 0.68
SNRNP48-203ENST00000634363 LDHBP07195 334 aaKnown RBP19.3■□□□□ 0.68
SNRNP48-203ENST00000634363 PRDX5P30044 214 aa19.3■□□□□ 0.68
SNRNP48-203ENST00000634363 ATG9AQ7Z3C6 839 aa19.3■□□□□ 0.68
SNRNP48-203ENST00000634363 ZCCHC17Q9NP64 241 aaKnown RBP19.3■□□□□ 0.68
SNRNP48-203ENST00000634363 USP40Q9NVE5 1235 aa19.3■□□□□ 0.68
SNRNP48-203ENST00000634363 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
SNRNP48-203ENST00000634363 PDHXO00330 501 aa19.29■□□□□ 0.68
SNRNP48-203ENST00000634363 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
SNRNP48-203ENST00000634363 NFIAQ12857 509 aa19.29■□□□□ 0.68
SNRNP48-203ENST00000634363 ATP2B3Q16720 1220 aa19.29■□□□□ 0.68
SNRNP48-203ENST00000634363 CENPFP49454 3210 aa19.28■□□□□ 0.68
SNRNP48-203ENST00000634363 C17orf99Q6UX52 265 aa19.28■□□□□ 0.68
SNRNP48-203ENST00000634363 HDAC5Q9UQL6 1122 aa19.28■□□□□ 0.68
SNRNP48-203ENST00000634363 TNNQ9UQP3 1299 aa19.28■□□□□ 0.68
SNRNP48-203ENST00000634363 RPAP1Q9BWH6 1393 aaPredicted RBP19.28■□□□□ 0.68
SNRNP48-203ENST00000634363 HTTP42858 3142 aa19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 GNRH1P01148 92 aa19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 PSMC4P43686 418 aa19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 ANKRD23Q86SG2 305 aa19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 ZFPM1Q8IX07 1006 aa19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.68
SNRNP48-203ENST00000634363 PHKA1P46020 1223 aa19.26■□□□□ 0.67
SNRNP48-203ENST00000634363 FAM198AQ9UFP1 575 aa19.26■□□□□ 0.67
SNRNP48-203ENST00000634363 DENND2AQ9ULE3 1009 aa19.26■□□□□ 0.67
SNRNP48-203ENST00000634363 PA2G4Q9UQ80 394 aaKnown RBP19.26■□□□□ 0.67
SNRNP48-203ENST00000634363 MS4A1P11836 297 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 HOXD10P28358 340 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 CTGFP29279 349 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 PRMT2P55345 433 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 MTFR1Q15390 333 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 ZSCAN29Q8IWY8 852 aaPredicted RBP19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 RAET1EQ8TD07 263 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 MEIS3Q99687 375 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 MYH2Q9UKX2 1941 aa19.25■□□□□ 0.67
SNRNP48-203ENST00000634363 CIAO1O76071 339 aa19.24■□□□□ 0.67
SNRNP48-203ENST00000634363 GNAI3P08754 354 aa19.24■□□□□ 0.67
SNRNP48-203ENST00000634363 BIN2Q9UBW5 565 aaPredicted RBP19.24■□□□□ 0.67
SNRNP48-203ENST00000634363 SRRDQ9UH36 339 aa19.24■□□□□ 0.67
SNRNP48-203ENST00000634363 FBXO3Q9UK99 471 aa19.24■□□□□ 0.67
SNRNP48-203ENST00000634363 KCNH4Q9UQ05 1017 aa19.24■□□□□ 0.67
SNRNP48-203ENST00000634363 OSBPP22059 807 aa19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 ADORA1P30542 326 aa19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 IL15P40933 162 aaPredicted RBP19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 TIMM10P62072 90 aa19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 ITPRIPQ8IWB1 547 aa19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 ABCF2Q9UG63 623 aa19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 COLQQ9Y215 455 aaPredicted RBP19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 ZHX2Q9Y6X8 837 aa19.23■□□□□ 0.67
SNRNP48-203ENST00000634363 MKI67P46013 3256 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms