RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 IQCB1Q15051 598 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
GPC3-204ENST00000631057 ALX1Q15699 326 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 CPLX2Q6PUV4 134 aaKnown RBP9.39□□□□□ -0.91
GPC3-204ENST00000631057 CEP57L1Q8IYX8 460 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 SYNE4Q8N205 404 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 C17orf53Q8N3J3 647 aaPredicted RBP9.39□□□□□ -0.91
GPC3-204ENST00000631057 LPIN2Q92539 896 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 NAT10Q9H0A0 1025 aaKnown RBP9.39□□□□□ -0.91
GPC3-204ENST00000631057 PCDHA7Q9UN72 937 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 ANGEL1Q9UNK9 670 aaKnown RBP9.39□□□□□ -0.91
GPC3-204ENST00000631057 ZBTB1Q9Y2K1 713 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 BCORQ6W2J9 1755 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 BECN2A8MW95 431 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 NEMFO60524 1076 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 IDH1O75874 414 aaKnown RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 SLC5A1P13866 664 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 PDE6AP16499 860 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 GTF2F1P35269 517 aaKnown RBP eCLIP9.38□□□□□ -0.917e-8■■■■□ 26.3
GPC3-204ENST00000631057 PIP4K2BP78356 416 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 SYNE3Q6ZMZ3 975 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 C11orf57Q6ZUT1 292 aaPredicted RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 DZIP3Q86Y13 1208 aaKnown RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 ZNF34Q8IZ26 560 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 FMR1NBQ8N0W7 255 aaPredicted RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 LINC00301Q8NCQ3 95 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 TMEM87BQ96K49 555 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 PIH1D3Q9NQM4 214 aaKnown RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 FAM13BQ9NYF5 915 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 CLIP2Q9UDT6 1046 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 COL16A1Q07092 1604 aaPredicted RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 CICQ96RK0 1608 aaPredicted RBP9.38□□□□□ -0.91
GPC3-204ENST00000631057 ZNF532Q9HCE3 1301 aa9.38□□□□□ -0.91
GPC3-204ENST00000631057 EXOC5O00471 708 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
GPC3-204ENST00000631057 SPTLC2O15270 562 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 APPP05067 770 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 PHKA1P46020 1223 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 METAP2P50579 478 aaKnown RBP eCLIP9.37□□□□□ -0.91
GPC3-204ENST00000631057 RBM10P98175 930 aaKnown RBP9.37□□□□□ -0.91
GPC3-204ENST00000631057 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
GPC3-204ENST00000631057 UBE2Q2Q8WVN8 375 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 SDF4Q9BRK5 362 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
GPC3-204ENST00000631057 TCRBV5S4A2TA0A5A2 114 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 SEMA3EO15041 775 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 FGFR2P21802 821 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 KIF23Q02241 960 aaPredicted RBP9.37□□□□□ -0.91
GPC3-204ENST00000631057 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 OTUD7BQ6GQQ9 843 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 TBC1D10CQ8IV04 446 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 FBXO41Q8TF61 875 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 STRBPQ96SI9 672 aaKnown RBP9.37□□□□□ -0.91
GPC3-204ENST00000631057 CLIC4Q9Y696 253 aa9.37□□□□□ -0.91
GPC3-204ENST00000631057 UBN2Q6ZU65 1347 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 A0A1B0GUL6 1792 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 CASZ1Q86V15 1759 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 ZBTB43O43298 467 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 POLR3DP05423 398 aaPredicted RBP9.36□□□□□ -0.91
GPC3-204ENST00000631057 SMYD5Q6GMV2 418 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 APOA5Q6Q788 366 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 CYB5R4Q7L1T6 521 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 DHX40Q8IX18 779 aaKnown RBP9.36□□□□□ -0.91
GPC3-204ENST00000631057 JMYQ8N9B5 988 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 SPATA5Q8NB90 893 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 SYTL4Q96C24 671 aaPredicted RBP9.36□□□□□ -0.91
GPC3-204ENST00000631057 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
GPC3-204ENST00000631057 CNNM2Q9H8M5 875 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 WWC3Q9ULE0 1092 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 STK36Q9NRP7 1315 aa9.36□□□□□ -0.91
GPC3-204ENST00000631057 RTL9Q8NET4 1388 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 MYH2Q9UKX2 1941 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 MYH13Q9UKX3 1938 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 A0A1B0GVL5 298 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 B4E1Z4 1266 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 PATL2C9JE40 543 aaKnown RBP9.35□□□□□ -0.91
GPC3-204ENST00000631057 GNAT2P19087 354 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 CMA1P23946 247 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 LIFRP42702 1097 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NDUFA8P51970 172 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 EIF5P55010 431 aaKnown RBP9.35□□□□□ -0.91
GPC3-204ENST00000631057 TPM4P67936 248 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 TRIM29Q14134 588 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 SLC39A14Q15043 492 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 PARP10Q53GL7 1025 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NFXL1Q6ZNB6 911 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 BARGINQ6ZT62 677 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 SGMS1Q86VZ5 419 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms