RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 RPAP1Q9BWH6 1393 aaPredicted RBP25.36■■□□□ 1.65
TARDBP-228ENST00000629725 NBPF7P0C2Y1 421 aaPredicted RBP25.36■■□□□ 1.65
TARDBP-228ENST00000629725 HOXD10P28358 340 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 CTGFP29279 349 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 LRRC24Q50LG9 513 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 MIGA2Q7L4E1 593 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 NKX2-3Q8TAU0 364 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 RAET1EQ8TD07 263 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 TRIM47Q96LD4 638 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 SUGT1Q9Y2Z0 365 aa25.36■■□□□ 1.65
TARDBP-228ENST00000629725 PDE8BO95263 885 aa25.35■■□□□ 1.65
TARDBP-228ENST00000629725 BCAMP50895 628 aa25.35■■□□□ 1.65
TARDBP-228ENST00000629725 ANKRD23Q86SG2 305 aa25.35■■□□□ 1.65
TARDBP-228ENST00000629725 BICC1Q9H694 974 aaKnown RBP25.35■■□□□ 1.65
TARDBP-228ENST00000629725 MYH13Q9UKX3 1938 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 PDHXO00330 501 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 FMNL1O95466 1100 aaPredicted RBP25.34■■□□□ 1.65
TARDBP-228ENST00000629725 OSBPP22059 807 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 INPP5BP32019 993 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 GRK4P32298 578 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 HHIPL2Q6UWX4 724 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 VGLL2Q8N8G2 317 aa25.34■■□□□ 1.65
TARDBP-228ENST00000629725 RBM27Q9P2N5 1060 aaKnown RBP25.34■■□□□ 1.65
TARDBP-228ENST00000629725 RABL6Q3YEC7 729 aaPredicted RBP25.33■■□□□ 1.65
TARDBP-228ENST00000629725 UTYO14607 1347 aa25.33■■□□□ 1.64
TARDBP-228ENST00000629725 LAMA3Q16787 3333 aa25.32■■□□□ 1.64
TARDBP-228ENST00000629725 GJA8P48165 433 aa25.32■■□□□ 1.64
TARDBP-228ENST00000629725 SPINK5Q9NQ38 1064 aaPredicted RBP25.32■■□□□ 1.64
TARDBP-228ENST00000629725 MYPNQ86TC9 1320 aa25.32■■□□□ 1.64
TARDBP-228ENST00000629725 FAM151AQ8WW52 585 aa25.31■■□□□ 1.64
TARDBP-228ENST00000629725 HTATIP2Q9BUP3 242 aa25.31■■□□□ 1.64
TARDBP-228ENST00000629725 KCNH4Q9UQ05 1017 aa25.31■■□□□ 1.64
TARDBP-228ENST00000629725 ADGRA2Q96PE1 1338 aa25.31■■□□□ 1.64
TARDBP-228ENST00000629725 COL6A3P12111 3177 aa25.3■■□□□ 1.64
TARDBP-228ENST00000629725 MGAMO43451 1857 aa25.3■■□□□ 1.64
TARDBP-228ENST00000629725 GJB1P08034 283 aa25.3■■□□□ 1.64
TARDBP-228ENST00000629725 CCL5P13501 91 aa25.3■■□□□ 1.64
TARDBP-228ENST00000629725 RNF208Q9H0X6 261 aa25.3■■□□□ 1.64
TARDBP-228ENST00000629725 BIN2Q9UBW5 565 aaPredicted RBP25.3■■□□□ 1.64
TARDBP-228ENST00000629725 ZNF112Q9UJU3 913 aa25.3■■□□□ 1.64
TARDBP-228ENST00000629725 IFIT1P09914 478 aaKnown RBP25.29■■□□□ 1.64
TARDBP-228ENST00000629725 UBE2Q1Q7Z7E8 422 aa25.29■■□□□ 1.64
TARDBP-228ENST00000629725 KIF16BQ96L93 1317 aa25.29■■□□□ 1.64
TARDBP-228ENST00000629725 UBXN2AP68543 259 aa25.28■■□□□ 1.64
TARDBP-228ENST00000629725 TCP10Q12799 353 aa25.28■■□□□ 1.64
TARDBP-228ENST00000629725 PUM3Q15397 648 aaKnown RBP25.28■■□□□ 1.64
TARDBP-228ENST00000629725 ANKRD44Q8N8A2 993 aa25.28■■□□□ 1.64
TARDBP-228ENST00000629725 KLHDC4Q8TBB5 520 aa25.28■■□□□ 1.64
TARDBP-228ENST00000629725 PARK7Q99497 189 aaKnown RBP25.28■■□□□ 1.64
TARDBP-228ENST00000629725 MOGSQ13724 837 aa25.27■■□□□ 1.64
TARDBP-228ENST00000629725 WDR66Q8TBY9 1149 aa25.27■■□□□ 1.64
TARDBP-228ENST00000629725 MRS2Q9HD23 443 aa25.27■■□□□ 1.64
TARDBP-228ENST00000629725 FGFR2P21802 821 aa25.26■■□□□ 1.63
TARDBP-228ENST00000629725 FCGRTP55899 365 aa25.26■■□□□ 1.63
TARDBP-228ENST00000629725 PRKCZQ05513 592 aa25.26■■□□□ 1.63
TARDBP-228ENST00000629725 NOL9Q5SY16 702 aaKnown RBP25.26■■□□□ 1.63
TARDBP-228ENST00000629725 NR2E3Q9Y5X4 410 aa25.26■■□□□ 1.63
TARDBP-228ENST00000629725 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
TARDBP-228ENST00000629725 CDC42EP5Q6NZY7 148 aa25.25■■□□□ 1.63
TARDBP-228ENST00000629725 SLAIN1Q8ND83 568 aa25.25■■□□□ 1.63
TARDBP-228ENST00000629725 CYP2C8P10632 490 aa25.24■■□□□ 1.63
TARDBP-228ENST00000629725 BCRP11274 1271 aa25.24■■□□□ 1.63
TARDBP-228ENST00000629725 NFIAQ12857 509 aa25.24■■□□□ 1.63
TARDBP-228ENST00000629725 U2AF1L4Q8WU68 220 aaKnown RBP25.24■■□□□ 1.63
TARDBP-228ENST00000629725 PRO3102Q9H379 93 aa25.24■■□□□ 1.63
TARDBP-228ENST00000629725 DAGLAQ9Y4D2 1042 aa25.24■■□□□ 1.63
TARDBP-228ENST00000629725 A0A0C4DFX4 3053 aa25.23■■□□□ 1.63
TARDBP-228ENST00000629725 CXCL11O14625 94 aa25.23■■□□□ 1.63
TARDBP-228ENST00000629725 GPAT2Q6NUI2 795 aa25.23■■□□□ 1.63
TARDBP-228ENST00000629725 FARP2O94887 1054 aaPredicted RBP25.22■■□□□ 1.63
TARDBP-228ENST00000629725 SLC5A1P13866 664 aa25.22■■□□□ 1.63
TARDBP-228ENST00000629725 DIXDC1Q155Q3 683 aa25.22■■□□□ 1.63
TARDBP-228ENST00000629725 LPIN2Q92539 896 aa25.22■■□□□ 1.63
TARDBP-228ENST00000629725 GABRQQ9UN88 632 aa25.22■■□□□ 1.63
TARDBP-228ENST00000629725 UNC93B1Q9H1C4 597 aa25.21■■□□□ 1.63
TARDBP-228ENST00000629725 FAM198AQ9UFP1 575 aa25.21■■□□□ 1.63
TARDBP-228ENST00000629725 ZBTB7BO15156 539 aaPredicted RBP25.2■■□□□ 1.62
TARDBP-228ENST00000629725 SGPL1O95470 568 aa25.2■■□□□ 1.62
TARDBP-228ENST00000629725 PRDX5P30044 214 aa25.2■■□□□ 1.62
TARDBP-228ENST00000629725 FASTKD5Q7L8L6 764 aaKnown RBP25.2■■□□□ 1.62
TARDBP-228ENST00000629725 USP40Q9NVE5 1235 aa25.2■■□□□ 1.62
TARDBP-228ENST00000629725 DOCK2Q92608 1830 aa25.2■■□□□ 1.62
TARDBP-228ENST00000629725 ADCY3O60266 1144 aa25.19■■□□□ 1.62
TARDBP-228ENST00000629725 A0A0G2JLL6 359 aaPredicted RBP25.18■■□□□ 1.62
TARDBP-228ENST00000629725 EYA2O00167 538 aa25.18■■□□□ 1.62
TARDBP-228ENST00000629725 LDHBP07195 334 aaKnown RBP25.18■■□□□ 1.62
TARDBP-228ENST00000629725 PRRT2Q7Z6L0 340 aaPredicted RBP25.18■■□□□ 1.62
TARDBP-228ENST00000629725 PICK1Q9NRD5 415 aa25.18■■□□□ 1.62
TARDBP-228ENST00000629725 ZHX2Q9Y6X8 837 aa25.18■■□□□ 1.62
TARDBP-228ENST00000629725 EVI5O60447 810 aa25.17■■□□□ 1.62
TARDBP-228ENST00000629725 FLT3LGP49771 235 aa25.17■■□□□ 1.62
TARDBP-228ENST00000629725 ZFPM1Q8IX07 1006 aa25.17■■□□□ 1.62
TARDBP-228ENST00000629725 SCYL3Q8IZE3 742 aa25.17■■□□□ 1.62
TARDBP-228ENST00000629725 USP44Q9H0E7 712 aa25.17■■□□□ 1.62
TARDBP-228ENST00000629725 PTPRFP10586 1907 aa25.17■■□□□ 1.62
TARDBP-228ENST00000629725 PTPRCP08575 1304 aa25.16■■□□□ 1.62
TARDBP-228ENST00000629725 MYH2Q9UKX2 1941 aa25.16■■□□□ 1.62
TARDBP-228ENST00000629725 A0A1W2PPC1 479 aa25.16■■□□□ 1.62
TARDBP-228ENST00000629725 PHF20L1A8MW92 1017 aa25.16■■□□□ 1.62
TARDBP-228ENST00000629725 PTPRAP18433 802 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms