RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 ZFYVE28Q9HCC9 887 aa19.71■□□□□ 0.75
PNKP-222ENST00000629088 GNL3LQ9NVN8 582 aaKnown RBP19.71■□□□□ 0.75
PNKP-222ENST00000629088 CSADQ9Y600 493 aa19.71■□□□□ 0.75
PNKP-222ENST00000629088 KIAA0100Q14667 2235 aaKnown RBP19.71■□□□□ 0.75
PNKP-222ENST00000629088 ATP2B3Q16720 1220 aa19.7■□□□□ 0.74
PNKP-222ENST00000629088 HABP4Q5JVS0 413 aaKnown RBP19.7■□□□□ 0.74
PNKP-222ENST00000629088 COPRSQ9NQ92 184 aa19.7■□□□□ 0.74
PNKP-222ENST00000629088 MYH13Q9UKX3 1938 aa19.7■□□□□ 0.74
PNKP-222ENST00000629088 SALL1Q9NSC2 1324 aa19.7■□□□□ 0.74
PNKP-222ENST00000629088 ZNF333Q96JL9 665 aa19.69■□□□□ 0.74
PNKP-222ENST00000629088 LRRFIP2Q9Y608 721 aaKnown RBP19.69■□□□□ 0.74
PNKP-222ENST00000629088 PTCH2Q9Y6C5 1203 aa19.69■□□□□ 0.74
PNKP-222ENST00000629088 SPDYE5A6NIY4 337 aa19.68■□□□□ 0.74
PNKP-222ENST00000629088 DCAF15Q66K64 600 aa19.68■□□□□ 0.74
PNKP-222ENST00000629088 SIL1Q9H173 461 aa19.68■□□□□ 0.74
PNKP-222ENST00000629088 SNCAIPQ9Y6H5 919 aa19.68■□□□□ 0.74
PNKP-222ENST00000629088 GNAI3P08754 354 aa19.67■□□□□ 0.74
PNKP-222ENST00000629088 MTX1Q13505 466 aa19.67■□□□□ 0.74
PNKP-222ENST00000629088 ARHGEF6Q15052 776 aa19.67■□□□□ 0.74
PNKP-222ENST00000629088 MEIS3Q99687 375 aa19.67■□□□□ 0.74
PNKP-222ENST00000629088 TMEM106CQ9BVX2 250 aa19.67■□□□□ 0.74
PNKP-222ENST00000629088 DENND2AQ9ULE3 1009 aa19.67■□□□□ 0.74
PNKP-222ENST00000629088 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
PNKP-222ENST00000629088 ERO1BQ86YB8 467 aa19.66■□□□□ 0.74
PNKP-222ENST00000629088 ZGPATQ8N5A5 531 aaKnown RBP19.66■□□□□ 0.74
PNKP-222ENST00000629088 FAM151AQ8WW52 585 aa19.66■□□□□ 0.74
PNKP-222ENST00000629088 ZKSCAN4Q969J2 545 aaPredicted RBP19.66■□□□□ 0.74
PNKP-222ENST00000629088 WRNIP1Q96S55 665 aa19.66■□□□□ 0.74
PNKP-222ENST00000629088 ZCCHC17Q9NP64 241 aaKnown RBP19.66■□□□□ 0.74
PNKP-222ENST00000629088 DAGLAQ9Y4D2 1042 aa19.66■□□□□ 0.74
PNKP-222ENST00000629088 PDS5AQ29RF7 1337 aaKnown RBP19.66■□□□□ 0.74
PNKP-222ENST00000629088 BTBD19C9JJ37 291 aa19.65■□□□□ 0.74
PNKP-222ENST00000629088 IPO8O15397 1037 aaKnown RBP19.65■□□□□ 0.74
PNKP-222ENST00000629088 LDHBP07195 334 aaKnown RBP19.65■□□□□ 0.74
PNKP-222ENST00000629088 CETPP11597 493 aa19.65■□□□□ 0.74
PNKP-222ENST00000629088 NBPF11Q86T75 865 aa19.65■□□□□ 0.74
PNKP-222ENST00000629088 ARHGAP39Q9C0H5 1083 aa19.65■□□□□ 0.74
PNKP-222ENST00000629088 TLR2O60603 784 aa19.64■□□□□ 0.73
PNKP-222ENST00000629088 WDHD1O75717 1129 aaPredicted RBP19.64■□□□□ 0.73
PNKP-222ENST00000629088 PRDX5P30044 214 aa19.64■□□□□ 0.73
PNKP-222ENST00000629088 ZNF341Q9BYN7 854 aa19.64■□□□□ 0.73
PNKP-222ENST00000629088 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.73
PNKP-222ENST00000629088 IRF6O14896 467 aa19.63■□□□□ 0.73
PNKP-222ENST00000629088 MYCP01106 439 aaPredicted RBP19.63■□□□□ 0.73
PNKP-222ENST00000629088 PHKA1P46020 1223 aa19.63■□□□□ 0.73
PNKP-222ENST00000629088 SNAPC2Q13487 334 aa19.63■□□□□ 0.73
PNKP-222ENST00000629088 SLC4A8Q2Y0W8 1093 aa19.63■□□□□ 0.73
PNKP-222ENST00000629088 CCDC102BQ68D86 513 aa19.63■□□□□ 0.73
PNKP-222ENST00000629088 AKAP2Q9Y2D5 859 aa19.63■□□□□ 0.73
PNKP-222ENST00000629088 SRGAP3O43295 1099 aa19.62■□□□□ 0.73
PNKP-222ENST00000629088 LACTBP83111 547 aaPredicted RBP19.62■□□□□ 0.73
PNKP-222ENST00000629088 PPIL2Q13356 520 aa19.62■□□□□ 0.73
PNKP-222ENST00000629088 DIXDC1Q155Q3 683 aa19.62■□□□□ 0.73
PNKP-222ENST00000629088 CDC42EP5Q6NZY7 148 aa19.62■□□□□ 0.73
PNKP-222ENST00000629088 SH3TC2Q8TF17 1288 aa19.62■□□□□ 0.73
PNKP-222ENST00000629088 PPATQ06203 517 aa19.61■□□□□ 0.73
PNKP-222ENST00000629088 MIGA2Q7L4E1 593 aa19.61■□□□□ 0.73
PNKP-222ENST00000629088 ZNF112Q9UJU3 913 aa19.61■□□□□ 0.73
PNKP-222ENST00000629088 RBBP6Q7Z6E9 1792 aaKnown RBP19.6■□□□□ 0.73
PNKP-222ENST00000629088 GAKO14976 1311 aa19.6■□□□□ 0.73
PNKP-222ENST00000629088 TRIM27P14373 513 aa19.6■□□□□ 0.73
PNKP-222ENST00000629088 MVPQ14764 893 aaKnown RBP19.6■□□□□ 0.73
PNKP-222ENST00000629088 KIF22Q14807 665 aa19.6■□□□□ 0.73
PNKP-222ENST00000629088 ATF7IPQ6VMQ6 1270 aa19.6■□□□□ 0.73
PNKP-222ENST00000629088 SLF2Q8IX21 1173 aa19.6■□□□□ 0.73
PNKP-222ENST00000629088 ECM2O94769 699 aaPredicted RBP19.59■□□□□ 0.73
PNKP-222ENST00000629088 ADORA1P30542 326 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 INPP5BP32019 993 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 NFIAQ12857 509 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 RASGRF1Q13972 1273 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 NOL9Q5SY16 702 aaKnown RBP19.59■□□□□ 0.73
PNKP-222ENST00000629088 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
PNKP-222ENST00000629088 FAM163AQ96GL9 167 aaPredicted RBP19.59■□□□□ 0.73
PNKP-222ENST00000629088 IDI2Q9BXS1 227 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 USP40Q9NVE5 1235 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 FAM198AQ9UFP1 575 aa19.59■□□□□ 0.73
PNKP-222ENST00000629088 A0A1B0GUL7 405 aa19.58■□□□□ 0.72
PNKP-222ENST00000629088 ENTPD3O75355 529 aa19.58■□□□□ 0.72
PNKP-222ENST00000629088 GNAI2P04899 355 aa19.58■□□□□ 0.72
PNKP-222ENST00000629088 C17orf99Q6UX52 265 aa19.58■□□□□ 0.72
PNKP-222ENST00000629088 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
PNKP-222ENST00000629088 RFX7Q2KHR2 1363 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 CTGFP29279 349 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 FXR1P51114 621 aaKnown RBP eCLIP19.57■□□□□ 0.72
PNKP-222ENST00000629088 TIMM10P62072 90 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 TCP10Q12799 353 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 TFCP2Q12800 502 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
PNKP-222ENST00000629088 XAGE2Q96GT9 111 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 CPA4Q9UI42 421 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 KCNH4Q9UQ05 1017 aa19.57■□□□□ 0.72
PNKP-222ENST00000629088 COLQQ9Y215 455 aaPredicted RBP19.57■□□□□ 0.72
PNKP-222ENST00000629088 CEP290O15078 2479 aa19.56■□□□□ 0.72
PNKP-222ENST00000629088 GNRH1P01148 92 aa19.56■□□□□ 0.72
PNKP-222ENST00000629088 ANKRD23Q86SG2 305 aa19.56■□□□□ 0.72
PNKP-222ENST00000629088 ATRNL1Q5VV63 1379 aa19.56■□□□□ 0.72
PNKP-222ENST00000629088 PDHXO00330 501 aa19.55■□□□□ 0.72
PNKP-222ENST00000629088 PSMC4P43686 418 aa19.55■□□□□ 0.72
PNKP-222ENST00000629088 PRMT2P55345 433 aa19.55■□□□□ 0.72
PNKP-222ENST00000629088 TRIM47Q96LD4 638 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms