RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 SNRKQ9NRH2 765 aa17■□□□□ 0.31
SOX2-OT-242ENST00000627501 SAGE1Q9NXZ1 904 aa17■□□□□ 0.31
SOX2-OT-242ENST00000627501 FAM198AQ9UFP1 575 aa17■□□□□ 0.31
SOX2-OT-242ENST00000627501 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
SOX2-OT-242ENST00000627501 IREB2P48200 963 aaKnown RBP16.99■□□□□ 0.31
SOX2-OT-242ENST00000627501 TNNI2P48788 182 aa16.99■□□□□ 0.31
SOX2-OT-242ENST00000627501 VGLL4Q14135 290 aa16.99■□□□□ 0.31
SOX2-OT-242ENST00000627501 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
SOX2-OT-242ENST00000627501 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
SOX2-OT-242ENST00000627501 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 TM4SF4P48230 202 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 MECOMQ03112 1051 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 MCOLN1Q9GZU1 580 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 TMOD2Q9NZR1 351 aa16.98■□□□□ 0.31
SOX2-OT-242ENST00000627501 GAKO14976 1311 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 FAM83AQ86UY5 434 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 SIRT2Q8IXJ6 389 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 ANKRD13AQ8IZ07 590 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 DDX4Q9NQI0 724 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 DBNLQ9UJU6 430 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 SNCAIPQ9Y6H5 919 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 RFX7Q2KHR2 1363 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 OTOFQ9HC10 1997 aa16.97■□□□□ 0.31
SOX2-OT-242ENST00000627501 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 MS4A1P11836 297 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 INPP5BP32019 993 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 BTDP43251 543 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 DGKZQ13574 1117 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 EAF2Q96CJ1 260 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 OPTNQ96CV9 577 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 PTPN18Q99952 460 aa16.96■□□□□ 0.31
SOX2-OT-242ENST00000627501 ZBTB22O15209 634 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 RGS3P49796 1198 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 IFNL1Q8IU54 200 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 ZNF296Q8WUU4 475 aaPredicted RBP16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 WRNIP1Q96S55 665 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
SOX2-OT-242ENST00000627501 ATRNL1Q5VV63 1379 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 RPAP1Q9BWH6 1393 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 APBB1O00213 710 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 WDHD1O75717 1129 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 ZBTB48P10074 688 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 NSUN4Q96CB9 384 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 CASP8AP2Q9UKL3 1982 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
SOX2-OT-242ENST00000627501 MANSC4A6NHS7 340 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 ZAP70P43403 619 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 RHBDL3P58872 404 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 PICALMQ13492 652 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 REM2Q8IYK8 340 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 BRI3BPQ8WY22 251 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 IL1RAPL2Q9NP60 686 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
SOX2-OT-242ENST00000627501 DDTLA6NHG4 134 aaPredicted RBP16.92■□□□□ 0.3
SOX2-OT-242ENST00000627501 GPR25O00155 361 aa16.92■□□□□ 0.3
SOX2-OT-242ENST00000627501 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
SOX2-OT-242ENST00000627501 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
SOX2-OT-242ENST00000627501 ADGRA1Q86SQ6 560 aa16.92■□□□□ 0.3
SOX2-OT-242ENST00000627501 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.92■□□□□ 0.3
SOX2-OT-242ENST00000627501 GPR75-ASB3A0A0A6YYF3 556 aa16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 UQCRFS1P1P0C7P4 283 aa16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 CAP1Q01518 475 aa16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 CSADQ9Y600 493 aa16.91■□□□□ 0.3
SOX2-OT-242ENST00000627501 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 CCDC85CA6NKD9 419 aa16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 FAM196BA6NMK8 535 aa16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 AACSQ86V21 672 aa16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 FAM43AQ8N2R8 423 aa16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
SOX2-OT-242ENST00000627501 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms