RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 HHIPL2Q6UWX4 724 aa24.55■■□□□ 1.52
R3HCC1-210ENST00000625275 GNL3LQ9NVN8 582 aaKnown RBP24.55■■□□□ 1.52
R3HCC1-210ENST00000625275 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
R3HCC1-210ENST00000625275 APOBEC3HQ6NTF7 200 aaKnown RBP24.54■■□□□ 1.52
R3HCC1-210ENST00000625275 GPR25O00155 361 aa24.53■■□□□ 1.52
R3HCC1-210ENST00000625275 FKBP1CQ5VVH2 108 aa24.53■■□□□ 1.52
R3HCC1-210ENST00000625275 IFNL1Q8IU54 200 aa24.53■■□□□ 1.52
R3HCC1-210ENST00000625275 RPAP1Q9BWH6 1393 aaPredicted RBP24.53■■□□□ 1.52
R3HCC1-210ENST00000625275 SEMA3EO15041 775 aa24.52■■□□□ 1.52
R3HCC1-210ENST00000625275 GJA5P36382 358 aa24.52■■□□□ 1.52
R3HCC1-210ENST00000625275 PHKA1P46020 1223 aa24.52■■□□□ 1.52
R3HCC1-210ENST00000625275 HDAC1Q13547 482 aaPredicted RBP24.52■■□□□ 1.52
R3HCC1-210ENST00000625275 FAM83AQ86UY5 434 aa24.52■■□□□ 1.52
R3HCC1-210ENST00000625275 SURF6O75683 361 aaKnown RBP24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 ELP3Q9H9T3 547 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 NOP58Q9Y2X3 529 aaKnown RBP24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 SALL1Q9NSC2 1324 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 PRDX5P30044 214 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 ERICH6BQ5W0A0 696 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 R3HDMLQ9H3Y0 253 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 DENND2AQ9ULE3 1009 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 EXOC6BQ9Y2D4 811 aa24.51■■□□□ 1.51
R3HCC1-210ENST00000625275 IGF2BP3O00425 579 aaKnown RBP eCLIP24.5■■□□□ 1.51
R3HCC1-210ENST00000625275 ADORA1P30542 326 aa24.5■■□□□ 1.51
R3HCC1-210ENST00000625275 RGS19P49795 217 aa24.5■■□□□ 1.51
R3HCC1-210ENST00000625275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.5■■□□□ 1.51
R3HCC1-210ENST00000625275 OPTNQ96CV9 577 aa24.5■■□□□ 1.51
R3HCC1-210ENST00000625275 DAGLAQ9Y4D2 1042 aa24.5■■□□□ 1.51
R3HCC1-210ENST00000625275 ZBTB22O15209 634 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 FKTNO75072 461 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 IGHDP01880 384 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 LDHBP07195 334 aaKnown RBP24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 VGLL4Q14135 290 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 DIXDC1Q155Q3 683 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 CCDC102BQ68D86 513 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 PDE4DIPQ5VU43 2346 aa24.49■■□□□ 1.51
R3HCC1-210ENST00000625275 MAP3K9P80192 1104 aa24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 G3BP1Q13283 466 aaKnown RBP eCLIP24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 PKN2Q16513 984 aaKnown RBP24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 HOOK2Q96ED9 719 aa24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 RWDD1Q9H446 243 aaPredicted RBP24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 DCTPP1Q9H773 170 aa24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 CSADQ9Y600 493 aa24.48■■□□□ 1.51
R3HCC1-210ENST00000625275 AKAP2Q9Y2D5 859 aa24.47■■□□□ 1.51
R3HCC1-210ENST00000625275 PDS5AQ29RF7 1337 aaKnown RBP24.46■■□□□ 1.51
R3HCC1-210ENST00000625275 A0A1B0GUL7 405 aa24.46■■□□□ 1.51
R3HCC1-210ENST00000625275 TFCP2Q12800 502 aa24.46■■□□□ 1.51
R3HCC1-210ENST00000625275 OS9Q13438 667 aaPredicted RBP24.46■■□□□ 1.51
R3HCC1-210ENST00000625275 OTUD7BQ6GQQ9 843 aa24.46■■□□□ 1.51
R3HCC1-210ENST00000625275 TESPA1A2RU30 521 aaPredicted RBP24.45■■□□□ 1.51
R3HCC1-210ENST00000625275 TIMM10P62072 90 aa24.45■■□□□ 1.51
R3HCC1-210ENST00000625275 MLLT1Q03111 559 aaPredicted RBP24.45■■□□□ 1.51
R3HCC1-210ENST00000625275 RASGRF1Q13972 1273 aa24.45■■□□□ 1.51
R3HCC1-210ENST00000625275 ZGPATQ8N5A5 531 aaKnown RBP24.45■■□□□ 1.51
R3HCC1-210ENST00000625275 CNKSR2Q8WXI2 1034 aa24.45■■□□□ 1.51
R3HCC1-210ENST00000625275 HSP90AB4PQ58FF6 505 aa24.45■■□□□ 1.5
R3HCC1-210ENST00000625275 DCAF15Q66K64 600 aa24.45■■□□□ 1.5
R3HCC1-210ENST00000625275 CDC42EP5Q6NZY7 148 aa24.45■■□□□ 1.5
R3HCC1-210ENST00000625275 XAGE2Q96GT9 111 aa24.45■■□□□ 1.5
R3HCC1-210ENST00000625275 WRNIP1Q96S55 665 aa24.45■■□□□ 1.5
R3HCC1-210ENST00000625275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.45■■□□□ 1.5
R3HCC1-210ENST00000625275 FAM151AQ8WW52 585 aa24.44■■□□□ 1.5
R3HCC1-210ENST00000625275 MS4A4AQ96JQ5 239 aa24.44■■□□□ 1.5
R3HCC1-210ENST00000625275 HPS5Q9UPZ3 1129 aa24.44■■□□□ 1.5
R3HCC1-210ENST00000625275 MYO5AQ9Y4I1 1855 aaKnown RBP24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 MAST2Q6P0Q8 1798 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 SPDYE5A6NIY4 337 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 APBB1O00213 710 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 CRHR2Q13324 411 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 OTUD5Q96G74 571 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 PTPN18Q99952 460 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 SNCAIPQ9Y6H5 919 aa24.43■■□□□ 1.5
R3HCC1-210ENST00000625275 ERC1Q8IUD2 1116 aa24.42■■□□□ 1.5
R3HCC1-210ENST00000625275 RAB11FIP3O75154 756 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 GTF2A2P52657 109 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 TCP10Q12799 353 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 NFIAQ12857 509 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 FBXO46Q6PJ61 603 aaPredicted RBP24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 DZIP1Q86YF9 867 aaKnown RBP24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 BRI3BPQ8WY22 251 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 GCC1Q96CN9 775 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 ZNF341Q9BYN7 854 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 PTPRFP10586 1907 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 DOCK1Q14185 1865 aa24.41■■□□□ 1.5
R3HCC1-210ENST00000625275 GAKO14976 1311 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 CCL15-CCL14A0A0B4J2E2 113 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 SOX10P56693 466 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 CCL15Q16663 113 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 ERO1BQ86YB8 467 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 SMC5Q8IY18 1101 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 RHPN1Q8TCX5 695 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 ZKSCAN4Q969J2 545 aaPredicted RBP24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 CCDC136Q96JN2 1154 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 NEUROD6Q96NK8 337 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 USP40Q9NVE5 1235 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 PPP4R2Q9NY27 417 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 ABCF2Q9UG63 623 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 CDK5RAP2Q96SN8 1893 aa24.4■■□□□ 1.5
R3HCC1-210ENST00000625275 KIF1BPQ96EK5 621 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms