RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 SURF6O75683 361 aaKnown RBP18.25■□□□□ 0.51
LINC00643-206ENST00000623985 ZBTB48P10074 688 aaPredicted RBP18.25■□□□□ 0.51
LINC00643-206ENST00000623985 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
LINC00643-206ENST00000623985 DZIP1Q86YF9 867 aaKnown RBP18.25■□□□□ 0.51
LINC00643-206ENST00000623985 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
LINC00643-206ENST00000623985 ANKRD13AQ8IZ07 590 aa18.25■□□□□ 0.51
LINC00643-206ENST00000623985 DDX19BQ9UMR2 479 aa18.25■□□□□ 0.51
LINC00643-206ENST00000623985 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
LINC00643-206ENST00000623985 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
LINC00643-206ENST00000623985 GAKO14976 1311 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 SIPA1L1O43166 1804 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 TRPA1O75762 1119 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
LINC00643-206ENST00000623985 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
LINC00643-206ENST00000623985 HOOK2Q96ED9 719 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 SLC10A4Q96EP9 437 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 CLMNQ96JQ2 1002 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 RFX7Q2KHR2 1363 aa18.24■□□□□ 0.51
LINC00643-206ENST00000623985 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
LINC00643-206ENST00000623985 TM4SF4P48230 202 aa18.23■□□□□ 0.51
LINC00643-206ENST00000623985 CDC42EP5Q6NZY7 148 aa18.23■□□□□ 0.51
LINC00643-206ENST00000623985 SLF2Q8IX21 1173 aa18.23■□□□□ 0.51
LINC00643-206ENST00000623985 SPATA5Q8NB90 893 aa18.23■□□□□ 0.51
LINC00643-206ENST00000623985 HMG20BQ9P0W2 317 aa18.23■□□□□ 0.51
LINC00643-206ENST00000623985 MCAMP43121 646 aa18.22■□□□□ 0.51
LINC00643-206ENST00000623985 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
LINC00643-206ENST00000623985 MROH7-TTC4A0A0A0MT08 1334 aa18.22■□□□□ 0.51
LINC00643-206ENST00000623985 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
LINC00643-206ENST00000623985 MANSC4A6NHS7 340 aaPredicted RBP18.21■□□□□ 0.51
LINC00643-206ENST00000623985 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
LINC00643-206ENST00000623985 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC00643-206ENST00000623985 FAM151AQ8WW52 585 aa18.21■□□□□ 0.51
LINC00643-206ENST00000623985 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.51
LINC00643-206ENST00000623985 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
LINC00643-206ENST00000623985 MYH8P13535 1937 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 TTC39AQ5SRH9 613 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 DCAF15Q66K64 600 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 ERC1Q8IUD2 1116 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.2■□□□□ 0.5
LINC00643-206ENST00000623985 FAM163AQ96GL9 167 aaPredicted RBP18.2■□□□□ 0.5
LINC00643-206ENST00000623985 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 USP40Q9NVE5 1235 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 CSADQ9Y600 493 aa18.2■□□□□ 0.5
LINC00643-206ENST00000623985 INHBEP58166 350 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 MECOMQ03112 1051 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 NFIAQ12857 509 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 VGLL4Q14135 290 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.19■□□□□ 0.5
LINC00643-206ENST00000623985 OPTNQ96CV9 577 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 CFHR5Q9BXR6 569 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
LINC00643-206ENST00000623985 COL2A1P02458 1487 aaPredicted RBP18.19■□□□□ 0.5
LINC00643-206ENST00000623985 DDX60LQ5H9U9 1706 aaKnown RBP18.18■□□□□ 0.5
LINC00643-206ENST00000623985 CAPN15O75808 1086 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 GJA5P36382 358 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 GSTO1P78417 241 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 MAP3K9P80192 1104 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 TCP10Q12799 353 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 HSP90AB4PQ58FF6 505 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 RPAP2Q8IXW5 612 aaPredicted RBP18.18■□□□□ 0.5
LINC00643-206ENST00000623985 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
LINC00643-206ENST00000623985 WRNIP1Q96S55 665 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 IDI2Q9BXS1 227 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
LINC00643-206ENST00000623985 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
LINC00643-206ENST00000623985 EXOC6BQ9Y2D4 811 aa18.18■□□□□ 0.5
LINC00643-206ENST00000623985 HMMRO75330 724 aa18.17■□□□□ 0.5
LINC00643-206ENST00000623985 BTDP43251 543 aa18.17■□□□□ 0.5
LINC00643-206ENST00000623985 NOM1Q5C9Z4 860 aaKnown RBP18.17■□□□□ 0.5
LINC00643-206ENST00000623985 ZNF384Q8TF68 577 aa18.17■□□□□ 0.5
LINC00643-206ENST00000623985 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
LINC00643-206ENST00000623985 ZNF341Q9BYN7 854 aa18.17■□□□□ 0.5
LINC00643-206ENST00000623985 MGAMO43451 1857 aa18.17■□□□□ 0.5
LINC00643-206ENST00000623985 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 ENTPD3O75355 529 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 IFNL1Q8IU54 200 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 TLR7Q9NYK1 1049 aaKnown RBP18.16■□□□□ 0.5
LINC00643-206ENST00000623985 RAI14Q9P0K7 980 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 SNCAIPQ9Y6H5 919 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 LOC285556D6RIA3 1793 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
LINC00643-206ENST00000623985 SPDYE5A6NIY4 337 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 IGSF3O75054 1194 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 MAP4K4O95819 1239 aaPredicted RBP18.15■□□□□ 0.5
LINC00643-206ENST00000623985 LDHCP07864 332 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 RGS3P49796 1198 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
LINC00643-206ENST00000623985 ABHD8Q96I13 439 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 LRP2BPQ9P2M1 347 aa18.15■□□□□ 0.5
LINC00643-206ENST00000623985 TESPA1A2RU30 521 aaPredicted RBP18.14■□□□□ 0.49
LINC00643-206ENST00000623985 IGF2BP3O00425 579 aaKnown RBP eCLIP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms