RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 ST13P50502 369 aaKnown RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 COBLL1Q53SF7 1204 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 CPLX2Q6PUV4 134 aaKnown RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 PGAP2Q9UHJ9 254 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 ITM2BQ9Y287 266 aa10.07□□□□□ -0.8
CDKL5-206ENST00000623610 POLR1AO95602 1720 aaPredicted RBP10.07□□□□□ -0.8
CDKL5-206ENST00000623610 SPHKAPQ2M3C7 1700 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 PRPF3O43395 683 aaKnown RBP10.06□□□□□ -0.8
CDKL5-206ENST00000623610 SORBS3O60504 671 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 TPM3P06753 285 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 CCDC172P0C7W6 258 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 MTMR3Q13615 1198 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-206ENST00000623610 NFXL1Q6ZNB6 911 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 ANKLE2Q86XL3 938 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.06□□□□□ -0.8
CDKL5-206ENST00000623610 MAGED1Q9Y5V3 778 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-206ENST00000623610 SNX5Q9Y5X3 404 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 MYO5BQ9ULV0 1848 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 NEURL4Q96JN8 1562 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 CCDC159P0C7I6 412 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 ZNF853P0CG23 659 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 TMED1Q13445 227 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 SLMAPQ14BN4 828 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 IFNL2Q8IZJ0 200 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 C2orf49Q9BVC5 232 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-206ENST00000623610 TSPY26PQ9H489 355 aa10.06□□□□□ -0.8
CDKL5-206ENST00000623610 KLHL33A6NCF5 533 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 OSBPP22059 807 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 LTKP29376 864 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 COPAP53621 1224 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 DMTNQ08495 405 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 RASA3Q14644 834 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 KIAA0825Q8IV33 1275 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 APPBP2Q92624 585 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 FAM167BQ9BTA0 163 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
CDKL5-206ENST00000623610 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 PTPRTO14522 1441 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 ADGRB3O60242 1522 aa10.05□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L10C9JJH3 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L12C9JPN9 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L21D6R901 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 PIK3CDO00329 1044 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 IDEP14735 1019 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 SERPINB3P29508 390 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 STIP1P31948 543 aaKnown RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 SLC10A5Q5PT55 438 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 CDCA2Q69YH5 1023 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 CCBE1Q6UXH8 406 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 DAAM2Q86T65 1068 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 DGKHQ86XP1 1220 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 N4BP2L2Q92802 583 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 ZNF594Q96JF6 807 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 SRRTQ9BXP5 876 aaKnown RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 RWDD1Q9H446 243 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 ZHX1Q9UKY1 873 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 CDV3Q9UKY7 258 aaKnown RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 KDM5AP29375 1690 aaKnown RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 F2P00734 622 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 DNAJB2P25686 324 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 KIF5BP33176 963 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 STT3AP46977 705 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 RBM5P52756 815 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 MMS22LQ6ZRQ5 1243 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 GIMAP8Q8ND71 665 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 GABPB2Q8TAK5 448 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-206ENST00000623610 FEZ1Q99689 392 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 AP1M1Q9BXS5 423 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 VPS33BQ9H267 617 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 ZNF232Q9UNY5 417 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 TMEM2Q9UHN6 1383 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 ARHGAP23Q9P227 1491 aa10.04□□□□□ -0.8
CDKL5-206ENST00000623610 SLIT1O75093 1534 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 TMEM131LA2VDJ0 1609 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 BBOX1O75936 387 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 PPP2R5CQ13362 524 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 LZTS2Q9BRK4 669 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 OSBPL5Q9H0X9 879 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-206ENST00000623610 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
CDKL5-206ENST00000623610 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms