RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ERO1BQ86YB8 467 aa13.75□□□□□ -0.21
LINC00963-214ENST00000622680 SH3TC2Q8TF17 1288 aa13.75□□□□□ -0.21
LINC00963-214ENST00000622680 GCC1Q96CN9 775 aa13.75□□□□□ -0.21
LINC00963-214ENST00000622680 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
LINC00963-214ENST00000622680 PTPRCP08575 1304 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
LINC00963-214ENST00000622680 CETPP11597 493 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 INPP5BP32019 993 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 LACTBP83111 547 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-214ENST00000622680 PPIL2Q13356 520 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 FAM83AQ86UY5 434 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 SSH1Q8WYL5 1049 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
LINC00963-214ENST00000622680 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 TLR2O60603 784 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 RFX5P48382 616 aaPredicted RBP13.73□□□□□ -0.21
LINC00963-214ENST00000622680 TCP10Q12799 353 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.73□□□□□ -0.21
LINC00963-214ENST00000622680 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
LINC00963-214ENST00000622680 MYH1P12882 1939 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 FRMPD3Q5JV73 1810 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 EYA2O00167 538 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 SLC5A1P13866 664 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 CTGFP29279 349 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 PRDX5P30044 214 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 NFIAQ12857 509 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 FKBP1CQ5VVH2 108 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 ATG9AQ7Z3C6 839 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 SIL1Q9H173 461 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 CPA4Q9UI42 421 aa13.72□□□□□ -0.21
LINC00963-214ENST00000622680 ADGRA2Q96PE1 1338 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 KIF22Q14807 665 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 ARHGEF6Q15052 776 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 CDC42EP5Q6NZY7 148 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 NBPF11Q86T75 865 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 ZCCHC17Q9NP64 241 aaKnown RBP13.71□□□□□ -0.21
LINC00963-214ENST00000622680 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
LINC00963-214ENST00000622680 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-214ENST00000622680 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-214ENST00000622680 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-214ENST00000622680 PPATQ06203 517 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 WDR66Q8TBY9 1149 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 FAM151AQ8WW52 585 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 LPIN2Q92539 896 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 MRIQ9BWK5 157 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 MYH8P13535 1937 aa13.7□□□□□ -0.22
LINC00963-214ENST00000622680 PDHXO00330 501 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 FXR1P51114 621 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00963-214ENST00000622680 MOGSQ13724 837 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 MTFR1Q15390 333 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 ATP2B3Q16720 1220 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 C17orf99Q6UX52 265 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 SHISA4Q96DD7 197 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 TRIM47Q96LD4 638 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 KCNH4Q9UQ05 1017 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 LAMA3Q16787 3333 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 RFX7Q2KHR2 1363 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
LINC00963-214ENST00000622680 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
LINC00963-214ENST00000622680 PSMC4P43686 418 aa13.68□□□□□ -0.22
LINC00963-214ENST00000622680 PHKA1P46020 1223 aa13.68□□□□□ -0.22
LINC00963-214ENST00000622680 ANKRD23Q86SG2 305 aa13.68□□□□□ -0.22
LINC00963-214ENST00000622680 ZFPM1Q8IX07 1006 aa13.68□□□□□ -0.22
LINC00963-214ENST00000622680 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
LINC00963-214ENST00000622680 ZNF112Q9UJU3 913 aa13.68□□□□□ -0.22
LINC00963-214ENST00000622680 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
LINC00963-214ENST00000622680 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-214ENST00000622680 E9PSI1 815 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 LDHBP07195 334 aaKnown RBP13.67□□□□□ -0.22
LINC00963-214ENST00000622680 SLURP2P0DP57 97 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 OSBPP22059 807 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 ADORA1P30542 326 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 USP40Q9NVE5 1235 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 COL6A3P12111 3177 aa13.67□□□□□ -0.22
LINC00963-214ENST00000622680 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
LINC00963-214ENST00000622680 H0YGN5 161 aa13.66□□□□□ -0.22
LINC00963-214ENST00000622680 GNRH1P01148 92 aa13.66□□□□□ -0.22
LINC00963-214ENST00000622680 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-214ENST00000622680 CYP2C8P10632 490 aa13.66□□□□□ -0.22
LINC00963-214ENST00000622680 RGS3P49796 1198 aa13.66□□□□□ -0.22
LINC00963-214ENST00000622680 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
LINC00963-214ENST00000622680 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
LINC00963-214ENST00000622680 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-214ENST00000622680 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
LINC00963-214ENST00000622680 SALL1Q9NSC2 1324 aa13.65□□□□□ -0.22
LINC00963-214ENST00000622680 FMNL1O95466 1100 aaPredicted RBP13.65□□□□□ -0.22
LINC00963-214ENST00000622680 GPAT2Q6NUI2 795 aa13.65□□□□□ -0.22
LINC00963-214ENST00000622680 RAET1EQ8TD07 263 aa13.65□□□□□ -0.22
LINC00963-214ENST00000622680 CEP126Q9P2H0 1117 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms