RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 FAM110CQ1W6H9 321 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 NOL9Q5SY16 702 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 SLC39A5Q6ZMH5 540 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 TXNRD3Q86VQ6 643 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 DZIP1LQ8IYY4 767 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 ARRDC4Q8NCT1 418 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 CCDC191Q8NCU4 936 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 TDRD7Q8NHU6 1098 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 TIFAQ96CG3 184 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 PRRX2Q99811 253 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 ZNF341Q9BYN7 854 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 SENP6Q9GZR1 1112 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 TDRD3Q9H7E2 651 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 TACC3Q9Y6A5 838 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 ZNF646O15015 1829 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 SSC5DA1L4H1 1573 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 DUOX1Q9NRD9 1551 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 A0A0G2JLL6 359 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 POTEB3A0JP26 581 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 DNM1LO00429 736 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 DNAJB2P25686 324 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 ITGB8P26012 769 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 RBM5P52756 815 aaKnown RBP eCLIP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 MAP3K10Q02779 954 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 CACNB2Q08289 660 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 ADGRE1Q14246 886 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 SNX17Q15036 470 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 PKN1Q16512 942 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 CCDC174Q6PII3 467 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 POTEBQ6S5H4 581 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 PRRT2Q7Z6L0 340 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 TTLL11Q8NHH1 800 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 PPM1EQ8WY54 764 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 LPAR1Q92633 364 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 BADQ92934 168 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 FBXW7Q969H0 707 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 FBXL18Q96ME1 805 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 NECAB3Q96P71 396 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 WRNIP1Q96S55 665 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 TMEM39BQ9GZU3 492 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 IRF2BPLQ9H1B7 796 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 SPINK5Q9NQ38 1064 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 HYPKQ9NX55 129 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 DBF4Q9UBU7 674 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-211ENST00000621526 AFG3L2Q9Y4W6 797 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 PCDHAC2Q9Y5I4 1007 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 ANKRD26Q9UPS8 1709 aa3.1□□□□□ -1.91
CPNE3-211ENST00000621526 TRIM43BA6NCK2 446 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TCP10L2B9ZVM9 353 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 ATP5J2-PTCD1G3V325 749 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 KIAA0355O15063 1070 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 NEFMP07197 916 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 PRKAR2AP13861 404 aaKnown RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 SLC5A1P13866 664 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 IGHMBP2P38935 993 aaKnown RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 RTP1P59025 263 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TRIM32Q13049 653 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 PABPC4Q13310 644 aaKnown RBP eCLIP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 CCDC85BQ15834 202 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 RTL5Q5HYW3 569 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 RASIP1Q5U651 963 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 ANKRD13CQ8N6S4 541 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 SMCR8Q8TEV9 937 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 FAM151AQ8WW52 585 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 SOCS4Q8WXH5 440 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TRIB2Q92519 343 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 USP6NLQ92738 828 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TRIM43Q96BQ3 446 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 RNPC3Q96LT9 517 aaKnown RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 CFAP53Q96M91 514 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 MFSD14AQ96MC6 490 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TOX2Q96NM4 488 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 NUDT12Q9BQG2 462 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 CHMP4AQ9BY43 222 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 PNNQ9H307 717 aaKnown RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 PRDM12Q9H4Q4 367 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 MORF4L1Q9UBU8 362 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 MSRAQ9UJ68 235 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 PNMA3Q9UL41 463 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TAOK2Q9UL54 1235 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 TTF2Q9UNY4 1162 aaKnown RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 SUGT1Q9Y2Z0 365 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 ZHX2Q9Y6X8 837 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 MYBBP1AQ9BQG0 1328 aaKnown RBP3.09□□□□□ -1.91
CPNE3-211ENST00000621526 UBR2Q8IWV8 1755 aa3.09□□□□□ -1.91
CPNE3-211ENST00000621526 RPAP1Q9BWH6 1393 aaPredicted RBP3.09□□□□□ -1.92
CPNE3-211ENST00000621526 PHF20L1A8MW92 1017 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 F8W031 263 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-211ENST00000621526 CTNND1O60716 968 aaKnown RBP3.08□□□□□ -1.92
CPNE3-211ENST00000621526 ANXA1P04083 346 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 CSF1RP07333 972 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 HOXB7P09629 217 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 PTPRAP18433 802 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 CYP2B6P20813 491 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 IGFBP4P22692 258 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 MAPK4P31152 587 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 INPP5BP32019 993 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 CRKP46108 304 aa3.08□□□□□ -1.92
CPNE3-211ENST00000621526 ATN1P54259 1190 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms