RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 ZNF296Q8WUU4 475 aaPredicted RBP25.34■■□□□ 1.65
SMC6-210ENST00000621152 OPTNQ96CV9 577 aa25.34■■□□□ 1.65
SMC6-210ENST00000621152 R3HDMLQ9H3Y0 253 aa25.34■■□□□ 1.65
SMC6-210ENST00000621152 C1orf115Q9H7X2 142 aa25.34■■□□□ 1.65
SMC6-210ENST00000621152 TCP10Q12799 353 aa25.33■■□□□ 1.65
SMC6-210ENST00000621152 POLA2Q14181 598 aa25.33■■□□□ 1.65
SMC6-210ENST00000621152 CTU1Q7Z7A3 348 aaKnown RBP25.33■■□□□ 1.65
SMC6-210ENST00000621152 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.33■■□□□ 1.65
SMC6-210ENST00000621152 FAM151AQ8WW52 585 aa25.33■■□□□ 1.65
SMC6-210ENST00000621152 HOOK2Q96ED9 719 aa25.33■■□□□ 1.65
SMC6-210ENST00000621152 CSADQ9Y600 493 aa25.33■■□□□ 1.65
SMC6-210ENST00000621152 VGLL4Q14135 290 aa25.32■■□□□ 1.64
SMC6-210ENST00000621152 SPTY2D1Q68D10 685 aaPredicted RBP25.32■■□□□ 1.64
SMC6-210ENST00000621152 SSH3Q8TE77 659 aa25.32■■□□□ 1.64
SMC6-210ENST00000621152 MIGA2Q7L4E1 593 aa25.31■■□□□ 1.64
SMC6-210ENST00000621152 CNKSR2Q8WXI2 1034 aa25.31■■□□□ 1.64
SMC6-210ENST00000621152 CFHR5Q9BXR6 569 aa25.31■■□□□ 1.64
SMC6-210ENST00000621152 IGF2BP3O00425 579 aaKnown RBP eCLIP25.3■■□□□ 1.64
SMC6-210ENST00000621152 SURF6O75683 361 aaKnown RBP25.3■■□□□ 1.64
SMC6-210ENST00000621152 NFIAQ12857 509 aa25.3■■□□□ 1.64
SMC6-210ENST00000621152 OS9Q13438 667 aaPredicted RBP25.3■■□□□ 1.64
SMC6-210ENST00000621152 NOM1Q5C9Z4 860 aaKnown RBP25.3■■□□□ 1.64
SMC6-210ENST00000621152 OTUD7BQ6GQQ9 843 aa25.3■■□□□ 1.64
SMC6-210ENST00000621152 DZIP1Q86YF9 867 aaKnown RBP25.3■■□□□ 1.64
SMC6-210ENST00000621152 PDS5AQ29RF7 1337 aaKnown RBP25.3■■□□□ 1.64
SMC6-210ENST00000621152 FKTNO75072 461 aa25.29■■□□□ 1.64
SMC6-210ENST00000621152 DCAF15Q66K64 600 aa25.29■■□□□ 1.64
SMC6-210ENST00000621152 ERICH6Q7L0X2 663 aa25.29■■□□□ 1.64
SMC6-210ENST00000621152 SLF2Q8IX21 1173 aa25.29■■□□□ 1.64
SMC6-210ENST00000621152 PANK1Q8TE04 598 aa25.29■■□□□ 1.64
SMC6-210ENST00000621152 HMG20BQ9P0W2 317 aa25.29■■□□□ 1.64
SMC6-210ENST00000621152 TESPA1A2RU30 521 aaPredicted RBP25.28■■□□□ 1.64
SMC6-210ENST00000621152 SPATA5Q8NB90 893 aa25.28■■□□□ 1.64
SMC6-210ENST00000621152 ZKSCAN4Q969J2 545 aaPredicted RBP25.28■■□□□ 1.64
SMC6-210ENST00000621152 WRNIP1Q96S55 665 aa25.28■■□□□ 1.64
SMC6-210ENST00000621152 PTPN18Q99952 460 aa25.28■■□□□ 1.64
SMC6-210ENST00000621152 FAM198AQ9UFP1 575 aa25.28■■□□□ 1.64
SMC6-210ENST00000621152 TBC1D9Q6ZT07 1266 aa25.27■■□□□ 1.64
SMC6-210ENST00000621152 ZFPM1Q8IX07 1006 aa25.27■■□□□ 1.64
SMC6-210ENST00000621152 OTUD5Q96G74 571 aa25.27■■□□□ 1.64
SMC6-210ENST00000621152 FAM163AQ96GL9 167 aaPredicted RBP25.27■■□□□ 1.64
SMC6-210ENST00000621152 MS4A4AQ96JQ5 239 aa25.27■■□□□ 1.64
SMC6-210ENST00000621152 ZNF341Q9BYN7 854 aa25.27■■□□□ 1.64
SMC6-210ENST00000621152 MYH13Q9UKX3 1938 aa25.27■■□□□ 1.64
SMC6-210ENST00000621152 UQCRFS1P1P0C7P4 283 aa25.26■■□□□ 1.63
SMC6-210ENST00000621152 PI16Q6UXB8 463 aa25.26■■□□□ 1.63
SMC6-210ENST00000621152 GPR108Q9NPR9 543 aa25.26■■□□□ 1.63
SMC6-210ENST00000621152 GAKO14976 1311 aa25.26■■□□□ 1.63
SMC6-210ENST00000621152 GTF2A2P52657 109 aa25.25■■□□□ 1.63
SMC6-210ENST00000621152 MECOMQ03112 1051 aa25.25■■□□□ 1.63
SMC6-210ENST00000621152 TNNI3KQ59H18 835 aa25.25■■□□□ 1.63
SMC6-210ENST00000621152 ERO1BQ86YB8 467 aa25.25■■□□□ 1.63
SMC6-210ENST00000621152 SNCAIPQ9Y6H5 919 aa25.25■■□□□ 1.63
SMC6-210ENST00000621152 FPGT-TNNI3KV9GXZ4 949 aa25.25■■□□□ 1.63
SMC6-210ENST00000621152 SPDYE5A6NIY4 337 aa25.24■■□□□ 1.63
SMC6-210ENST00000621152 MS4A1P11836 297 aa25.24■■□□□ 1.63
SMC6-210ENST00000621152 ARID4AP29374 1257 aaPredicted RBP25.24■■□□□ 1.63
SMC6-210ENST00000621152 PKN2Q16513 984 aaKnown RBP25.24■■□□□ 1.63
SMC6-210ENST00000621152 NOP58Q9Y2X3 529 aaKnown RBP25.24■■□□□ 1.63
SMC6-210ENST00000621152 RPAP1Q9BWH6 1393 aaPredicted RBP25.23■■□□□ 1.63
SMC6-210ENST00000621152 CCL15-CCL14A0A0B4J2E2 113 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 LDHCP07864 332 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 INPP5BP32019 993 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 BTDP43251 543 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 RGS3P49796 1198 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 CCL15Q16663 113 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 CCDC158Q5M9N0 1113 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 BRI3BPQ8WY22 251 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 DBNDD2Q9BQY9 259 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 IDI2Q9BXS1 227 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 RAI14Q9P0K7 980 aa25.23■■□□□ 1.63
SMC6-210ENST00000621152 ENTPD3O75355 529 aa25.22■■□□□ 1.63
SMC6-210ENST00000621152 MCAMP43121 646 aa25.22■■□□□ 1.63
SMC6-210ENST00000621152 CRHR2Q13324 411 aa25.22■■□□□ 1.63
SMC6-210ENST00000621152 TTC39AQ5SRH9 613 aa25.22■■□□□ 1.63
SMC6-210ENST00000621152 SNRKQ9NRH2 765 aa25.22■■□□□ 1.63
SMC6-210ENST00000621152 ZNF112Q9UJU3 913 aa25.22■■□□□ 1.63
SMC6-210ENST00000621152 MROH7-TTC4A0A0A0MT08 1334 aa25.21■■□□□ 1.63
SMC6-210ENST00000621152 GPR75-ASB3A0A0A6YYF3 556 aa25.21■■□□□ 1.63
SMC6-210ENST00000621152 GSTO1P78417 241 aa25.21■■□□□ 1.63
SMC6-210ENST00000621152 CEP85Q6P2H3 762 aa25.21■■□□□ 1.63
SMC6-210ENST00000621152 ZSCAN29Q8IWY8 852 aaPredicted RBP25.21■■□□□ 1.63
SMC6-210ENST00000621152 ZNF384Q8TF68 577 aa25.21■■□□□ 1.63
SMC6-210ENST00000621152 LRP2BPQ9P2M1 347 aa25.21■■□□□ 1.63
SMC6-210ENST00000621152 NSUN4Q96CB9 384 aaKnown RBP25.2■■□□□ 1.62
SMC6-210ENST00000621152 IRF6O14896 467 aa25.19■■□□□ 1.62
SMC6-210ENST00000621152 WDHD1O75717 1129 aaPredicted RBP25.19■■□□□ 1.62
SMC6-210ENST00000621152 CETPP11597 493 aa25.19■■□□□ 1.62
SMC6-210ENST00000621152 RGS19P49795 217 aa25.19■■□□□ 1.62
SMC6-210ENST00000621152 PPIL2Q13356 520 aa25.19■■□□□ 1.62
SMC6-210ENST00000621152 PICALMQ13492 652 aa25.19■■□□□ 1.62
SMC6-210ENST00000621152 CCDC8Q9H0W5 538 aaPredicted RBP25.19■■□□□ 1.62
SMC6-210ENST00000621152 HPS5Q9UPZ3 1129 aa25.19■■□□□ 1.62
SMC6-210ENST00000621152 PPATQ06203 517 aa25.18■■□□□ 1.62
SMC6-210ENST00000621152 SNAPC2Q13487 334 aa25.18■■□□□ 1.62
SMC6-210ENST00000621152 SH3BP5LQ7L8J4 393 aa25.18■■□□□ 1.62
SMC6-210ENST00000621152 FAM43AQ8N2R8 423 aa25.18■■□□□ 1.62
SMC6-210ENST00000621152 OTOFQ9HC10 1997 aa25.17■■□□□ 1.62
SMC6-210ENST00000621152 RHBDL3P58872 404 aa25.17■■□□□ 1.62
SMC6-210ENST00000621152 TAF1CQ15572 869 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms