RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 HDAC5Q9UQL6 1122 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 LMO7Q8WWI1 1683 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 FKBP15Q5T1M5 1219 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 NSUN7Q8NE18 718 aaKnown RBP15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 FANCLQ9NW38 375 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 ALDH1L1O75891 902 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TFCP2Q12800 502 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 DHX58Q96C10 678 aa15.75■□□□□ 0.11
CNTNAP3B-215ENST00000619138 ZSCAN12O43309 604 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 COBLO75128 1261 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 AKAP17AQ02040 695 aaKnown RBP15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 SART3Q15020 963 aaKnown RBP15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 CDCA7Q9BWT1 371 aaPredicted RBP15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 RRP15Q9Y3B9 282 aaKnown RBP15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 IGKV5-2P06315 115 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 STX17P56962 302 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 LRRFIP1Q32MZ4 808 aaKnown RBP15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 NEURL1BA8MQ27 555 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 GOLGA8BA8MQT2 603 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 SYKP43405 635 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 CC2D1AQ6P1N0 951 aaPredicted RBP15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 FOXR1Q6PIV2 292 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 AIFM3Q96NN9 605 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 CLIC6Q96NY7 704 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TSPYL1Q9H0U9 437 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 RCOR1Q9UKL0 485 aa15.74■□□□□ 0.11
CNTNAP3B-215ENST00000619138 N4BP1O75113 896 aaKnown RBP15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 PPP2R2CQ9Y2T4 447 aa15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 GCKRQ14397 625 aa15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 PLBD2Q8NHP8 589 aa15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 BAG1Q99933 345 aaPredicted RBP15.73■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TIMM10P62072 90 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 LONRF2Q1L5Z9 754 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 HMG20BQ9P0W2 317 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 KLF18A0A0U1RQI7 1052 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TADA3O75528 432 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TBC1D8O95759 1140 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 MTF1Q14872 753 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 FAM208AQ9UK61 1670 aaKnown RBP15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 CCP110O43303 1012 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 PFKFB1P16118 471 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 RBM43Q6ZSC3 357 aaKnown RBP15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TOGARAM2Q6ZUX3 1019 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 STOX1Q6ZVD7 989 aa15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
CNTNAP3B-215ENST00000619138 WDHD1O75717 1129 aaPredicted RBP15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TAF7LQ5H9L4 462 aa15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 DHX32Q7L7V1 743 aaKnown RBP15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 CNNM3Q8NE01 707 aa15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 EPB41L2O43491 1005 aaKnown RBP15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 ZNF569Q5MCW4 686 aa15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 ZNF526Q8TF50 670 aaPredicted RBP15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 AFF2P51816 1311 aa15.71■□□□□ 0.11
CNTNAP3B-215ENST00000619138 H3BQF6 201 aa15.71■□□□□ 0.1
CNTNAP3B-215ENST00000619138 AXDND1Q5T1B0 1012 aaPredicted RBP15.71■□□□□ 0.1
CNTNAP3B-215ENST00000619138 GOLGA1Q92805 767 aa15.71■□□□□ 0.1
CNTNAP3B-215ENST00000619138 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.1
CNTNAP3B-215ENST00000619138 RAI14Q9P0K7 980 aa15.71■□□□□ 0.1
CNTNAP3B-215ENST00000619138 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 EFCAB8A8MWE9 144 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 MCMDC2Q4G0Z9 681 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 DNAJC21Q5F1R6 531 aaKnown RBP15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 BICDL1Q6ZP65 573 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 RALYLQ86SE5 291 aaKnown RBP15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 L2HGDHQ9H9P8 463 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 IMPACTQ9P2X3 320 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 THRAP3Q9Y2W1 955 aaKnown RBP15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 NFXL1Q6ZNB6 911 aa15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
CNTNAP3B-215ENST00000619138 CBFA2T2O43439 604 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 NLRP12P59046 1061 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 OSBPL5Q9H0X9 879 aaPredicted RBP15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 DBNLQ9UJU6 430 aaKnown RBP15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 CTDNEP1O95476 244 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 CHMP4BP1P59074 171 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 TTC31Q49AM3 519 aaPredicted RBP15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 GPIHBP1Q8IV16 184 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 MYL5Q02045 173 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
CNTNAP3B-215ENST00000619138 FOXN1O15353 648 aa15.68■□□□□ 0.1
CNTNAP3B-215ENST00000619138 ZMYND10O75800 440 aa15.68■□□□□ 0.1
CNTNAP3B-215ENST00000619138 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
CNTNAP3B-215ENST00000619138 CCDC158Q5M9N0 1113 aa15.68■□□□□ 0.1
CNTNAP3B-215ENST00000619138 MICU3Q86XE3 530 aa15.68■□□□□ 0.1
CNTNAP3B-215ENST00000619138 GRAMD1CQ8IYS0 662 aa15.68■□□□□ 0.1
CNTNAP3B-215ENST00000619138 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms