RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CDC42EP5Q6NZY7 148 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 AACSQ86V21 672 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 TMEM39BQ9GZU3 492 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 IL1RAPL2Q9NP60 686 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 ANGEL1Q9UNK9 670 aaKnown RBP30.5■■■□□ 2.47
PMS1-220ENST00000618056 MAST2Q6P0Q8 1798 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 MECOMQ03112 1051 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 PRKG1Q13976 671 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 TBC1D9Q6ZT07 1266 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 RASAL3Q86YV0 1011 aa30.5■■■□□ 2.47
PMS1-220ENST00000618056 CLASRPQ8N2M8 674 aaKnown RBP30.5■■■□□ 2.47
PMS1-220ENST00000618056 AIDAQ96BJ3 306 aa30.49■■■□□ 2.47
PMS1-220ENST00000618056 OTOFQ9HC10 1997 aa30.49■■■□□ 2.47
PMS1-220ENST00000618056 RPAP1Q9BWH6 1393 aaPredicted RBP30.48■■■□□ 2.47
PMS1-220ENST00000618056 UNCXA6NJT0 531 aa30.48■■■□□ 2.47
PMS1-220ENST00000618056 ZNF384Q8TF68 577 aa30.48■■■□□ 2.47
PMS1-220ENST00000618056 NSUN4Q96CB9 384 aaKnown RBP30.48■■■□□ 2.47
PMS1-220ENST00000618056 ZIC5Q96T25 663 aa30.48■■■□□ 2.47
PMS1-220ENST00000618056 SNRKQ9NRH2 765 aa30.48■■■□□ 2.47
PMS1-220ENST00000618056 FOXN1O15353 648 aa30.47■■■□□ 2.47
PMS1-220ENST00000618056 IGSF3O75054 1194 aa30.47■■■□□ 2.47
PMS1-220ENST00000618056 MROH7-TTC4A0A0A0MT08 1334 aa30.47■■■□□ 2.47
PMS1-220ENST00000618056 APBB1O00213 710 aa30.46■■■□□ 2.47
PMS1-220ENST00000618056 CDAN1Q8IWY9 1227 aa30.46■■■□□ 2.47
PMS1-220ENST00000618056 USP40Q9NVE5 1235 aa30.46■■■□□ 2.47
PMS1-220ENST00000618056 FZD1Q9UP38 647 aa30.46■■■□□ 2.47
PMS1-220ENST00000618056 USP2O75604 605 aaPredicted RBP30.45■■■□□ 2.47
PMS1-220ENST00000618056 CYP2E1P05181 493 aaPredicted RBP30.45■■■□□ 2.47
PMS1-220ENST00000618056 GSTO1P78417 241 aa30.45■■■□□ 2.47
PMS1-220ENST00000618056 RAI14Q9P0K7 980 aa30.45■■■□□ 2.47
PMS1-220ENST00000618056 LRP2BPQ9P2M1 347 aa30.45■■■□□ 2.47
PMS1-220ENST00000618056 DOCK2Q92608 1830 aa30.45■■■□□ 2.46
PMS1-220ENST00000618056 LDHCP07864 332 aa30.44■■■□□ 2.46
PMS1-220ENST00000618056 IREB2P48200 963 aaKnown RBP30.44■■■□□ 2.46
PMS1-220ENST00000618056 FAM151AQ8WW52 585 aa30.44■■■□□ 2.46
PMS1-220ENST00000618056 BEGAINQ9BUH8 593 aa30.44■■■□□ 2.46
PMS1-220ENST00000618056 LAMB1P07942 1786 aa30.44■■■□□ 2.46
PMS1-220ENST00000618056 GPR75-ASB3A0A0A6YYF3 556 aa30.44■■■□□ 2.46
PMS1-220ENST00000618056 ZAP70P43403 619 aa30.44■■■□□ 2.46
PMS1-220ENST00000618056 KIF23Q02241 960 aaPredicted RBP30.44■■■□□ 2.46
PMS1-220ENST00000618056 CTCFP49711 727 aaPredicted RBP30.43■■■□□ 2.46
PMS1-220ENST00000618056 NFIAQ12857 509 aa30.43■■■□□ 2.46
PMS1-220ENST00000618056 HOOK2Q96ED9 719 aa30.43■■■□□ 2.46
PMS1-220ENST00000618056 IDI2Q9BXS1 227 aa30.43■■■□□ 2.46
PMS1-220ENST00000618056 RFX7Q2KHR2 1363 aa30.43■■■□□ 2.46
PMS1-220ENST00000618056 BTDP43251 543 aa30.42■■■□□ 2.46
PMS1-220ENST00000618056 REM2Q8IYK8 340 aaPredicted RBP30.42■■■□□ 2.46
PMS1-220ENST00000618056 FAM198AQ9UFP1 575 aa30.42■■■□□ 2.46
PMS1-220ENST00000618056 CA12O43570 354 aa30.41■■■□□ 2.46
PMS1-220ENST00000618056 IFIT2P09913 472 aaKnown RBP30.41■■■□□ 2.46
PMS1-220ENST00000618056 DCTPP1Q9H773 170 aa30.41■■■□□ 2.46
PMS1-220ENST00000618056 MAP4K4O95819 1239 aaPredicted RBP30.4■■■□□ 2.46
PMS1-220ENST00000618056 ANKRD13AQ8IZ07 590 aa30.4■■■□□ 2.46
PMS1-220ENST00000618056 CRBNQ96SW2 442 aa30.4■■■□□ 2.46
PMS1-220ENST00000618056 LRRCC1Q9C099 1032 aa30.4■■■□□ 2.46
PMS1-220ENST00000618056 PCDHB15Q9Y5E8 787 aa30.4■■■□□ 2.46
PMS1-220ENST00000618056 ENTPD3O75355 529 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 RHBDL3P58872 404 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 TCP10Q12799 353 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.38■■■□□ 2.45
PMS1-220ENST00000618056 SLC10A4Q96EP9 437 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 CSRNP1Q96S65 589 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 PIH1D3Q9NQM4 214 aaKnown RBP30.38■■■□□ 2.45
PMS1-220ENST00000618056 CDK5RAP2Q96SN8 1893 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 WDHD1O75717 1129 aaPredicted RBP30.38■■■□□ 2.45
PMS1-220ENST00000618056 NAA16Q6N069 864 aaPredicted RBP30.38■■■□□ 2.45
PMS1-220ENST00000618056 CLMNQ96JQ2 1002 aa30.38■■■□□ 2.45
PMS1-220ENST00000618056 HSPA8P11142 646 aaKnown RBP30.37■■■□□ 2.45
PMS1-220ENST00000618056 RGS3P49796 1198 aa30.37■■■□□ 2.45
PMS1-220ENST00000618056 SPRYD7Q5W111 196 aa30.37■■■□□ 2.45
PMS1-220ENST00000618056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.37■■■□□ 2.45
PMS1-220ENST00000618056 NPM3O75607 178 aaKnown RBP30.36■■■□□ 2.45
PMS1-220ENST00000618056 DCAF15Q66K64 600 aa30.36■■■□□ 2.45
PMS1-220ENST00000618056 PRDM10Q9NQV6 1147 aa30.36■■■□□ 2.45
PMS1-220ENST00000618056 FOCADQ5VW36 1801 aa30.35■■■□□ 2.45
PMS1-220ENST00000618056 TMED8Q6PL24 325 aaPredicted RBP30.35■■■□□ 2.45
PMS1-220ENST00000618056 NDUFB9Q9Y6M9 179 aa30.35■■■□□ 2.45
PMS1-220ENST00000618056 ZBTB48P10074 688 aaPredicted RBP30.34■■■□□ 2.45
PMS1-220ENST00000618056 MAP3K9P80192 1104 aa30.34■■■□□ 2.45
PMS1-220ENST00000618056 AAMPQ13685 434 aa30.34■■■□□ 2.45
PMS1-220ENST00000618056 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.34■■■□□ 2.45
PMS1-220ENST00000618056 ZFPM1Q8IX07 1006 aa30.33■■■□□ 2.45
PMS1-220ENST00000618056 WNK4Q96J92 1243 aa30.33■■■□□ 2.45
PMS1-220ENST00000618056 ANTXR1Q9H6X2 564 aa30.33■■■□□ 2.45
PMS1-220ENST00000618056 DDX4Q9NQI0 724 aaKnown RBP30.33■■■□□ 2.45
PMS1-220ENST00000618056 SAGE1Q9NXZ1 904 aa30.33■■■□□ 2.45
PMS1-220ENST00000618056 LBX1P52954 281 aa30.32■■■□□ 2.44
PMS1-220ENST00000618056 PPP4CP60510 307 aa30.32■■■□□ 2.44
PMS1-220ENST00000618056 TTF1Q15361 905 aaPredicted RBP30.32■■■□□ 2.44
PMS1-220ENST00000618056 NOL10Q9BSC4 688 aaKnown RBP30.32■■■□□ 2.44
PMS1-220ENST00000618056 IDH1O75874 414 aaKnown RBP30.31■■■□□ 2.44
PMS1-220ENST00000618056 BAG3O95817 575 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 TM4SF4P48230 202 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 COL13A1Q5TAT6 717 aaPredicted RBP30.31■■■□□ 2.44
PMS1-220ENST00000618056 ADGRA1Q86SQ6 560 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 ZNF341Q9BYN7 854 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 ATRNL1Q5VV63 1379 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 SMARCA5O60264 1052 aaPredicted RBP30.31■■■□□ 2.44
PMS1-220ENST00000618056 ATP5JP18859 108 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 MKRN3Q13064 507 aaKnown RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms