RNA–Protein interactions for RNA: ENST00000618035.4

RCC1L-205, Transcript of RCC1 like, human

TSL 1 (best) BASIC

Gene RCC1L, Length 1,409 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RCC1L-205	ENST00000618035	KIF23	Q02241	960 aa	Predicted RBP	32.81	■■■□□ 2.84
RCC1L-205	ENST00000618035	MECOM	Q03112	1051 aa		32.81	■■■□□ 2.84
RCC1L-205	ENST00000618035	HSP90AB4P	Q58FF6	505 aa		32.81	■■■□□ 2.84
RCC1L-205	ENST00000618035	FKBP1C	Q5VVH2	108 aa		32.81	■■■□□ 2.84
RCC1L-205	ENST00000618035	OTOF	Q9HC10	1997 aa		32.81	■■■□□ 2.84
RCC1L-205	ENST00000618035	TNNI2	P48788	182 aa		32.8	■■■□□ 2.84
RCC1L-205	ENST00000618035	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.8	■■■□□ 2.84
RCC1L-205	ENST00000618035	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.8	■■■□□ 2.84
RCC1L-205	ENST00000618035	ERICH6	Q7L0X2	663 aa		32.8	■■■□□ 2.84
RCC1L-205	ENST00000618035	DZIP1	Q86YF9	867 aa	Known RBP	32.8	■■■□□ 2.84
RCC1L-205	ENST00000618035	FAM163A	Q96GL9	167 aa	Predicted RBP	32.8	■■■□□ 2.84
RCC1L-205	ENST00000618035	FAM83A	Q86UY5	434 aa		32.79	■■■□□ 2.84
RCC1L-205	ENST00000618035	AIDA	Q96BJ3	306 aa		32.79	■■■□□ 2.84
RCC1L-205	ENST00000618035	APBB1	O00213	710 aa		32.78	■■■□□ 2.84
RCC1L-205	ENST00000618035	NFIA	Q12857	509 aa		32.78	■■■□□ 2.84
RCC1L-205	ENST00000618035	AACS	Q86V21	672 aa		32.78	■■■□□ 2.84
RCC1L-205	ENST00000618035	TMOD2	Q9NZR1	351 aa		32.78	■■■□□ 2.84
RCC1L-205	ENST00000618035	PPP1R12B	O60237	982 aa	Predicted RBP	32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	CYP2E1	P05181	493 aa	Predicted RBP	32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	NSUN4	Q96CB9	384 aa	Known RBP	32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	USP40	Q9NVE5	1235 aa		32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	HSPA8	P11142	646 aa	Known RBP	32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	KIF1BP	Q96EK5	621 aa		32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	CLMN	Q96JQ2	1002 aa		32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	FAM198A	Q9UFP1	575 aa		32.77	■■■□□ 2.84
RCC1L-205	ENST00000618035	ZAP70	P43403	619 aa		32.76	■■■□□ 2.83
RCC1L-205	ENST00000618035	CTCF	P49711	727 aa	Predicted RBP	32.76	■■■□□ 2.83
RCC1L-205	ENST00000618035	CSRNP1	Q96S65	589 aa		32.76	■■■□□ 2.83
RCC1L-205	ENST00000618035	MROH7-TTC4	A0A0A0MT08	1334 aa		32.75	■■■□□ 2.83
RCC1L-205	ENST00000618035	RFX7	Q2KHR2	1363 aa		32.74	■■■□□ 2.83
RCC1L-205	ENST00000618035	LBX1	P52954	281 aa		32.74	■■■□□ 2.83
RCC1L-205	ENST00000618035	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	GPR75-ASB3	A0A0A6YYF3	556 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	RAB11FIP3	O75154	756 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	BTD	P43251	543 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	TCP10	Q12799	353 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	ZFPM1	Q8IX07	1006 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	FAM151A	Q8WW52	585 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	RAI14	Q9P0K7	980 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	TSKS	Q9UJT2	592 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	NDUFB9	Q9Y6M9	179 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	MAST2	Q6P0Q8	1798 aa		32.73	■■■□□ 2.83
RCC1L-205	ENST00000618035	SLF2	Q8IX21	1173 aa		32.72	■■■□□ 2.83
RCC1L-205	ENST00000618035	BEGAIN	Q9BUH8	593 aa		32.72	■■■□□ 2.83
RCC1L-205	ENST00000618035	PIH1D3	Q9NQM4	214 aa	Known RBP	32.72	■■■□□ 2.83
RCC1L-205	ENST00000618035	LRP2BP	Q9P2M1	347 aa		32.72	■■■□□ 2.83
RCC1L-205	ENST00000618035	IREB2	P48200	963 aa	Known RBP	32.71	■■■□□ 2.83
RCC1L-205	ENST00000618035	RHBDL3	P58872	404 aa		32.71	■■■□□ 2.83
RCC1L-205	ENST00000618035	MKRN3	Q13064	507 aa	Known RBP	32.71	■■■□□ 2.83
RCC1L-205	ENST00000618035	PCDHB15	Q9Y5E8	787 aa		32.71	■■■□□ 2.83
RCC1L-205	ENST00000618035	LAMB1	P07942	1786 aa		32.71	■■■□□ 2.83
RCC1L-205	ENST00000618035	AK9	Q5TCS8	1911 aa		32.71	■■■□□ 2.83
RCC1L-205	ENST00000618035	CLASRP	Q8N2M8	674 aa	Known RBP	32.7	■■■□□ 2.83
RCC1L-205	ENST00000618035	IDI2	Q9BXS1	227 aa		32.7	■■■□□ 2.83
RCC1L-205	ENST00000618035	UNCX	A6NJT0	531 aa		32.69	■■■□□ 2.82
RCC1L-205	ENST00000618035	WDHD1	O75717	1129 aa	Predicted RBP	32.69	■■■□□ 2.82
RCC1L-205	ENST00000618035	SPRYD7	Q5W111	196 aa		32.69	■■■□□ 2.82
RCC1L-205	ENST00000618035	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.69	■■■□□ 2.82
RCC1L-205	ENST00000618035	DDX4	Q9NQI0	724 aa	Known RBP	32.69	■■■□□ 2.82
RCC1L-205	ENST00000618035	DOCK2	Q92608	1830 aa		32.69	■■■□□ 2.82
RCC1L-205	ENST00000618035	ANKRD13A	Q8IZ07	590 aa		32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	SLC10A4	Q96EP9	437 aa		32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	CRBN	Q96SW2	442 aa		32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	PRDM10	Q9NQV6	1147 aa		32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	CENPB	P07199	599 aa	Predicted RBP	32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	ANTXR1	Q9H6X2	564 aa		32.68	■■■□□ 2.82
RCC1L-205	ENST00000618035	GJA5	P36382	358 aa		32.67	■■■□□ 2.82
RCC1L-205	ENST00000618035	RGS3	P49796	1198 aa		32.67	■■■□□ 2.82
RCC1L-205	ENST00000618035	GSTO1	P78417	241 aa		32.67	■■■□□ 2.82
RCC1L-205	ENST00000618035	ADGRA1	Q86SQ6	560 aa		32.67	■■■□□ 2.82
RCC1L-205	ENST00000618035	SH3BP5L	Q7L8J4	393 aa		32.66	■■■□□ 2.82
RCC1L-205	ENST00000618035	WNK4	Q96J92	1243 aa		32.66	■■■□□ 2.82
RCC1L-205	ENST00000618035	BCL11A	Q9H165	835 aa		32.66	■■■□□ 2.82
RCC1L-205	ENST00000618035	RNF186	Q9NXI6	227 aa		32.66	■■■□□ 2.82
RCC1L-205	ENST00000618035	CA12	O43570	354 aa		32.65	■■■□□ 2.82
RCC1L-205	ENST00000618035	SMARCA5	O60264	1052 aa	Predicted RBP	32.65	■■■□□ 2.82
RCC1L-205	ENST00000618035	LDHC	P07864	332 aa		32.65	■■■□□ 2.82
RCC1L-205	ENST00000618035	MIGA2	Q7L4E1	593 aa		32.65	■■■□□ 2.82
RCC1L-205	ENST00000618035	DCTPP1	Q9H773	170 aa		32.65	■■■□□ 2.82
RCC1L-205	ENST00000618035	ENTPD3	O75355	529 aa		32.64	■■■□□ 2.82
RCC1L-205	ENST00000618035	IFIT2	P09913	472 aa	Known RBP	32.64	■■■□□ 2.82
RCC1L-205	ENST00000618035	VGLL4	Q14135	290 aa		32.64	■■■□□ 2.82
RCC1L-205	ENST00000618035	CDK5RAP2	Q96SN8	1893 aa		32.64	■■■□□ 2.81
RCC1L-205	ENST00000618035	TM4SF4	P48230	202 aa		32.63	■■■□□ 2.81
RCC1L-205	ENST00000618035	MAP3K9	P80192	1104 aa		32.63	■■■□□ 2.81
RCC1L-205	ENST00000618035	NAA16	Q6N069	864 aa	Predicted RBP	32.63	■■■□□ 2.81
RCC1L-205	ENST00000618035	REM2	Q8IYK8	340 aa	Predicted RBP	32.63	■■■□□ 2.81
RCC1L-205	ENST00000618035	ELP3	Q9H9T3	547 aa		32.63	■■■□□ 2.81
RCC1L-205	ENST00000618035	ATRNL1	Q5VV63	1379 aa		32.63	■■■□□ 2.81
RCC1L-205	ENST00000618035	CNKSR2	Q8WXI2	1034 aa		32.62	■■■□□ 2.81
RCC1L-205	ENST00000618035	LRRCC1	Q9C099	1032 aa		32.62	■■■□□ 2.81
RCC1L-205	ENST00000618035	DDTL	A6NHG4	134 aa	Predicted RBP	32.61	■■■□□ 2.81
RCC1L-205	ENST00000618035	TRPA1	O75762	1119 aa		32.61	■■■□□ 2.81
RCC1L-205	ENST00000618035	ZBTB48	P10074	688 aa	Predicted RBP	32.61	■■■□□ 2.81
RCC1L-205	ENST00000618035	PICALM	Q13492	652 aa		32.61	■■■□□ 2.81
RCC1L-205	ENST00000618035	SAGE1	Q9NXZ1	904 aa		32.61	■■■□□ 2.81
RCC1L-205	ENST00000618035	CASP8AP2	Q9UKL3	1982 aa		32.61	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms