RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 PTPN18Q99952 460 aa27.56■■■□□ 2
NEDD4L-237ENST00000617539 TESPA1A2RU30 521 aaPredicted RBP27.55■■■□□ 2
NEDD4L-237ENST00000617539 ALDH1A1P00352 501 aa27.55■■■□□ 2
NEDD4L-237ENST00000617539 MAP3K9P80192 1104 aa27.55■■■□□ 2
NEDD4L-237ENST00000617539 CDC42EP5Q6NZY7 148 aa27.55■■■□□ 2
NEDD4L-237ENST00000617539 XAGE2Q96GT9 111 aa27.55■■■□□ 2
NEDD4L-237ENST00000617539 MS4A4AQ96JQ5 239 aa27.54■■■□□ 2
NEDD4L-237ENST00000617539 PDS5AQ29RF7 1337 aaKnown RBP27.53■■■□□ 2
NEDD4L-237ENST00000617539 NFIAQ12857 509 aa27.53■■■□□ 2
NEDD4L-237ENST00000617539 SNCAIPQ9Y6H5 919 aa27.53■■■□□ 2
NEDD4L-237ENST00000617539 AK9Q5TCS8 1911 aa27.52■■■□□ 2
NEDD4L-237ENST00000617539 FKTNO75072 461 aa27.52■■■□□ 2
NEDD4L-237ENST00000617539 AKAP2Q9Y2D5 859 aa27.52■■■□□ 2
NEDD4L-237ENST00000617539 ZBED9Q6R2W3 1325 aa27.51■■□□□ 1.99
NEDD4L-237ENST00000617539 RLBP1P12271 317 aa27.51■■□□□ 1.99
NEDD4L-237ENST00000617539 FAM151AQ8WW52 585 aa27.51■■□□□ 1.99
NEDD4L-237ENST00000617539 FAM198AQ9UFP1 575 aa27.51■■□□□ 1.99
NEDD4L-237ENST00000617539 CSADQ9Y600 493 aa27.51■■□□□ 1.99
NEDD4L-237ENST00000617539 GAKO14976 1311 aa27.5■■□□□ 1.99
NEDD4L-237ENST00000617539 TCP10Q12799 353 aa27.5■■□□□ 1.99
NEDD4L-237ENST00000617539 ZKSCAN4Q969J2 545 aaPredicted RBP27.5■■□□□ 1.99
NEDD4L-237ENST00000617539 WRNIP1Q96S55 665 aa27.5■■□□□ 1.99
NEDD4L-237ENST00000617539 HPS5Q9UPZ3 1129 aa27.5■■□□□ 1.99
NEDD4L-237ENST00000617539 DOCK2Q92608 1830 aa27.5■■□□□ 1.99
NEDD4L-237ENST00000617539 RFX7Q2KHR2 1363 aa27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 SPDYE5A6NIY4 337 aa27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 CRHR2Q13324 411 aa27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 MVPQ14764 893 aaKnown RBP27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 BRI3BPQ8WY22 251 aa27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 OTUD5Q96G74 571 aa27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 USP40Q9NVE5 1235 aa27.49■■□□□ 1.99
NEDD4L-237ENST00000617539 POLA2Q14181 598 aa27.48■■□□□ 1.99
NEDD4L-237ENST00000617539 PKN2Q16513 984 aaKnown RBP27.48■■□□□ 1.99
NEDD4L-237ENST00000617539 MIGA2Q7L4E1 593 aa27.48■■□□□ 1.99
NEDD4L-237ENST00000617539 ZFPM1Q8IX07 1006 aa27.48■■□□□ 1.99
NEDD4L-237ENST00000617539 ZGPATQ8N5A5 531 aaKnown RBP27.48■■□□□ 1.99
NEDD4L-237ENST00000617539 NEUROD6Q96NK8 337 aa27.48■■□□□ 1.99
NEDD4L-237ENST00000617539 PI16Q6UXB8 463 aa27.47■■□□□ 1.99
NEDD4L-237ENST00000617539 ZNF384Q8TF68 577 aa27.47■■□□□ 1.99
NEDD4L-237ENST00000617539 HOOK2Q96ED9 719 aa27.47■■□□□ 1.99
NEDD4L-237ENST00000617539 C1orf115Q9H7X2 142 aa27.47■■□□□ 1.99
NEDD4L-237ENST00000617539 ABCF2Q9UG63 623 aa27.47■■□□□ 1.99
NEDD4L-237ENST00000617539 DCAF15Q66K64 600 aa27.46■■□□□ 1.99
NEDD4L-237ENST00000617539 SSH3Q8TE77 659 aa27.46■■□□□ 1.99
NEDD4L-237ENST00000617539 HMG20BQ9P0W2 317 aa27.46■■□□□ 1.99
NEDD4L-237ENST00000617539 CCL15-CCL14A0A0B4J2E2 113 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 INPP5BP32019 993 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 GTF2A2P52657 109 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 SOX10P56693 466 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 MLLT1Q03111 559 aaPredicted RBP27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 G3BP1Q13283 466 aaKnown RBP eCLIP27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 CCL15Q16663 113 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 OTUD7BQ6GQQ9 843 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 DZIP1Q86YF9 867 aaKnown RBP27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 ZNF341Q9BYN7 854 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 ATRNL1Q5VV63 1379 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 CENPFP49454 3210 aa27.45■■□□□ 1.98
NEDD4L-237ENST00000617539 ZBTB7BO15156 539 aaPredicted RBP27.44■■□□□ 1.98
NEDD4L-237ENST00000617539 ARID4AP29374 1257 aaPredicted RBP27.44■■□□□ 1.98
NEDD4L-237ENST00000617539 ERO1BQ86YB8 467 aa27.44■■□□□ 1.98
NEDD4L-237ENST00000617539 FTSJ3Q8IY81 847 aaKnown RBP27.44■■□□□ 1.98
NEDD4L-237ENST00000617539 FAM163AQ96GL9 167 aaPredicted RBP27.44■■□□□ 1.98
NEDD4L-237ENST00000617539 ZNF112Q9UJU3 913 aa27.44■■□□□ 1.98
NEDD4L-237ENST00000617539 ATP8B2P98198 1209 aa27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 CAP1Q01518 475 aa27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 MECOMQ03112 1051 aa27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 FBXO46Q6PJ61 603 aaPredicted RBP27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 ITPRIPQ8IWB1 547 aa27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 FAM43AQ8N2R8 423 aa27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 IDI2Q9BXS1 227 aa27.43■■□□□ 1.98
NEDD4L-237ENST00000617539 IRF6O14896 467 aa27.42■■□□□ 1.98
NEDD4L-237ENST00000617539 RGS3P49796 1198 aa27.42■■□□□ 1.98
NEDD4L-237ENST00000617539 SPATA5Q8NB90 893 aa27.42■■□□□ 1.98
NEDD4L-237ENST00000617539 MROH7-TTC4A0A0A0MT08 1334 aa27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 WDHD1O75717 1129 aaPredicted RBP27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 MCAMP43121 646 aa27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 SPTY2D1Q68D10 685 aaPredicted RBP27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 TBC1D9Q6ZT07 1266 aa27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 SH3BP5LQ7L8J4 393 aa27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 OTOP1Q7RTM1 612 aa27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 DDX4Q9NQI0 724 aaKnown RBP27.41■■□□□ 1.98
NEDD4L-237ENST00000617539 BTDP43251 543 aa27.4■■□□□ 1.98
NEDD4L-237ENST00000617539 PPIL2Q13356 520 aa27.4■■□□□ 1.98
NEDD4L-237ENST00000617539 GORABQ5T7V8 394 aa27.4■■□□□ 1.98
NEDD4L-237ENST00000617539 ERICH6Q7L0X2 663 aa27.4■■□□□ 1.98
NEDD4L-237ENST00000617539 CD99L2Q8TCZ2 262 aa27.4■■□□□ 1.98
NEDD4L-237ENST00000617539 MYO5AQ9Y4I1 1855 aaKnown RBP27.4■■□□□ 1.98
NEDD4L-237ENST00000617539 ENTPD3O75355 529 aa27.39■■□□□ 1.98
NEDD4L-237ENST00000617539 TNNI3KQ59H18 835 aa27.39■■□□□ 1.98
NEDD4L-237ENST00000617539 GPR108Q9NPR9 543 aa27.39■■□□□ 1.98
NEDD4L-237ENST00000617539 TRIM17Q9Y577 477 aa27.39■■□□□ 1.98
NEDD4L-237ENST00000617539 FPGT-TNNI3KV9GXZ4 949 aa27.39■■□□□ 1.98
NEDD4L-237ENST00000617539 MAST2Q6P0Q8 1798 aa27.39■■□□□ 1.98
NEDD4L-237ENST00000617539 GPR75-ASB3A0A0A6YYF3 556 aa27.38■■□□□ 1.97
NEDD4L-237ENST00000617539 CETPP11597 493 aa27.38■■□□□ 1.97
NEDD4L-237ENST00000617539 RHBDL3P58872 404 aa27.38■■□□□ 1.97
NEDD4L-237ENST00000617539 SLF2Q8IX21 1173 aa27.38■■□□□ 1.97
NEDD4L-237ENST00000617539 NSUN4Q96CB9 384 aaKnown RBP27.38■■□□□ 1.97
NEDD4L-237ENST00000617539 ZSWIM8A7E2V4 1837 aa27.38■■□□□ 1.97
NEDD4L-237ENST00000617539 BTBD19C9JJ37 291 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms