RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FUT8Q9BYC5 575 aa17.9■□□□□ 0.46
GPN1-212ENST00000616939 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.9■□□□□ 0.46
GPN1-212ENST00000616939 INTS13Q9NVM9 706 aa17.9■□□□□ 0.46
GPN1-212ENST00000616939 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
GPN1-212ENST00000616939 A0A087WZG4 1122 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 MAP2K7O14733 419 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 CPLX1O14810 134 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 POLR3GO15318 223 aaPredicted RBP17.89■□□□□ 0.45
GPN1-212ENST00000616939 CDKL5O76039 1030 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 SNRPA1P09661 255 aaKnown RBP17.89■□□□□ 0.45
GPN1-212ENST00000616939 SHC4Q6S5L8 630 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 NEK11Q8NG66 645 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 PLBD2Q8NHP8 589 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 NCOA7Q8NI08 942 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
GPN1-212ENST00000616939 TMEM232C9JQI7 657 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 TXLNAP40222 546 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 ANTXR2P58335 489 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 GNG11P61952 73 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 LMBR1LQ6UX01 489 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 KRBA2Q6ZNG9 492 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 GOLGA5Q8TBA6 731 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 DACH1Q9UI36 760 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 HOOK1Q9UJC3 728 aaKnown RBP17.88■□□□□ 0.45
GPN1-212ENST00000616939 GCP02774 474 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 ZNF18P17022 549 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 METTL16Q86W50 562 aaKnown RBP17.88■□□□□ 0.45
GPN1-212ENST00000616939 TC2NQ8N9U0 490 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 WDR24Q96S15 920 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
GPN1-212ENST00000616939 FOXP2O15409 715 aa17.87■□□□□ 0.45
GPN1-212ENST00000616939 SPECC1LQ69YQ0 1117 aa17.87■□□□□ 0.45
GPN1-212ENST00000616939 TTLL5Q6EMB2 1281 aa17.87■□□□□ 0.45
GPN1-212ENST00000616939 OSBP2Q969R2 916 aa17.87■□□□□ 0.45
GPN1-212ENST00000616939 GPHNQ9NQX3 736 aaPredicted RBP17.87■□□□□ 0.45
GPN1-212ENST00000616939 FANCLQ9NW38 375 aa17.87■□□□□ 0.45
GPN1-212ENST00000616939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
GPN1-212ENST00000616939 EYA2O00167 538 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 USP5P45974 858 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 ST5P78524 1137 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 PNOCQ13519 176 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 CT47A1Q5JQC4 288 aaPredicted RBP17.86■□□□□ 0.45
GPN1-212ENST00000616939 NT5DC1Q5TFE4 455 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 TRIML1Q8N9V2 468 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 ENOX1Q8TC92 643 aaKnown RBP17.86■□□□□ 0.45
GPN1-212ENST00000616939 NEUROD6Q96NK8 337 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 ZSCAN26Q16670 478 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 LONRF2Q1L5Z9 754 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
GPN1-212ENST00000616939 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 MLKLQ8NB16 471 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 MSANTD4Q8NCY6 345 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 IPO4Q8TEX9 1081 aaKnown RBP17.86■□□□□ 0.45
GPN1-212ENST00000616939 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
GPN1-212ENST00000616939 PANX2Q96RD6 677 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 NAA15Q9BXJ9 866 aaKnown RBP17.86■□□□□ 0.45
GPN1-212ENST00000616939 FBXO3Q9UK99 471 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 RAB21Q9UL25 225 aa17.86■□□□□ 0.45
GPN1-212ENST00000616939 ATRNO75882 1429 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 CHD4Q14839 1912 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 UBR2Q8IWV8 1755 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 MARCKSP29966 332 aaPredicted RBP17.85■□□□□ 0.45
GPN1-212ENST00000616939 MDM2Q00987 491 aaPredicted RBP17.85■□□□□ 0.45
GPN1-212ENST00000616939 SLC39A6Q13433 755 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 SRGAP1Q7Z6B7 1085 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 CEP112Q8N8E3 955 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 ALG1Q9BT22 464 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 STK36Q9NRP7 1315 aa17.85■□□□□ 0.45
GPN1-212ENST00000616939 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
GPN1-212ENST00000616939 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 RPS6KA5O75582 802 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 KRT40Q6A162 431 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
GPN1-212ENST00000616939 APPBP2Q92624 585 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 PCDHA5Q9Y5H7 936 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 PHKG2P15735 406 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 TOGARAM2Q6ZUX3 1019 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 CNNM3Q8NE01 707 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 DHX58Q96C10 678 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 RAI14Q9P0K7 980 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 KCNH3Q9ULD8 1083 aa17.84■□□□□ 0.45
GPN1-212ENST00000616939 ALS2Q96Q42 1657 aa17.83■□□□□ 0.45
GPN1-212ENST00000616939 A0A1B0GUL7 405 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 FGAP02671 866 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 TUBBP07437 444 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 CCDC175P0C221 793 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 GNL2Q13823 731 aaKnown RBP17.83■□□□□ 0.44
GPN1-212ENST00000616939 ISM2Q6H9L7 571 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 MAN1B1Q9UKM7 699 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 NID2Q14112 1375 aa17.83■□□□□ 0.44
GPN1-212ENST00000616939 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 IVLP07476 585 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 ACTN2P35609 894 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 SARSP49591 514 aaKnown RBP17.82■□□□□ 0.44
GPN1-212ENST00000616939 TIMM10P62072 90 aa17.82■□□□□ 0.44
GPN1-212ENST00000616939 PDE4BQ07343 736 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms