RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
UBXN1-218ENST00000616865 CCL15Q16663 113 aa18.34■□□□□ 0.53
UBXN1-218ENST00000616865 RPAP2Q8IXW5 612 aaPredicted RBP18.34■□□□□ 0.53
UBXN1-218ENST00000616865 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
UBXN1-218ENST00000616865 CSADQ9Y600 493 aa18.34■□□□□ 0.53
UBXN1-218ENST00000616865 HMMRO75330 724 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 GTF2A2P52657 109 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 ATP8B2P98198 1209 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 TAF1CQ15572 869 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-218ENST00000616865 LRRC24Q50LG9 513 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 CAVIN4Q5BKX8 364 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 METTL24Q5JXM2 366 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 VGLL2Q8N8G2 317 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 GCC1Q96CN9 775 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 OTUD5Q96G74 571 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 ZSWIM8A7E2V4 1837 aa18.33■□□□□ 0.52
UBXN1-218ENST00000616865 SPDYE5A6NIY4 337 aa18.32■□□□□ 0.52
UBXN1-218ENST00000616865 FRAT2O75474 233 aaPredicted RBP18.32■□□□□ 0.52
UBXN1-218ENST00000616865 PDE8BO95263 885 aa18.32■□□□□ 0.52
UBXN1-218ENST00000616865 CACNB3P54284 484 aa18.32■□□□□ 0.52
UBXN1-218ENST00000616865 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
UBXN1-218ENST00000616865 TEKT1Q969V4 418 aa18.32■□□□□ 0.52
UBXN1-218ENST00000616865 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
UBXN1-218ENST00000616865 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
UBXN1-218ENST00000616865 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
UBXN1-218ENST00000616865 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
UBXN1-218ENST00000616865 MAST3O60307 1309 aa18.3■□□□□ 0.52
UBXN1-218ENST00000616865 MTX1Q13505 466 aa18.3■□□□□ 0.52
UBXN1-218ENST00000616865 ZNF333Q96JL9 665 aa18.3■□□□□ 0.52
UBXN1-218ENST00000616865 ZDHHC15Q96MV8 337 aa18.3■□□□□ 0.52
UBXN1-218ENST00000616865 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
UBXN1-218ENST00000616865 PNMA6EA0A0J9YXQ4 647 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 BCAMP50895 628 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 ERICH6BQ5W0A0 696 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 WRNIP1Q96S55 665 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 PCDHB15Q9Y5E8 787 aa18.29■□□□□ 0.52
UBXN1-218ENST00000616865 EN2P19622 333 aaPredicted RBP18.28■□□□□ 0.52
UBXN1-218ENST00000616865 PUM3Q15397 648 aaKnown RBP18.28■□□□□ 0.52
UBXN1-218ENST00000616865 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
UBXN1-218ENST00000616865 APOBEC3HQ6NTF7 200 aaKnown RBP18.28■□□□□ 0.52
UBXN1-218ENST00000616865 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
UBXN1-218ENST00000616865 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
UBXN1-218ENST00000616865 RWDD1Q9H446 243 aaPredicted RBP18.28■□□□□ 0.52
UBXN1-218ENST00000616865 PTCH2Q9Y6C5 1203 aa18.28■□□□□ 0.52
UBXN1-218ENST00000616865 KIAA0100Q14667 2235 aaKnown RBP18.27■□□□□ 0.52
UBXN1-218ENST00000616865 CETPP11597 493 aa18.27■□□□□ 0.52
UBXN1-218ENST00000616865 FGFR2P21802 821 aa18.27■□□□□ 0.52
UBXN1-218ENST00000616865 OS9Q13438 667 aaPredicted RBP18.27■□□□□ 0.52
UBXN1-218ENST00000616865 SLC9C1Q4G0N8 1177 aa18.27■□□□□ 0.52
UBXN1-218ENST00000616865 SSH3Q8TE77 659 aa18.27■□□□□ 0.52
UBXN1-218ENST00000616865 ZKSCAN4Q969J2 545 aaPredicted RBP18.27■□□□□ 0.52
UBXN1-218ENST00000616865 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
UBXN1-218ENST00000616865 TMEM106CQ9BVX2 250 aa18.27■□□□□ 0.52
UBXN1-218ENST00000616865 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
UBXN1-218ENST00000616865 IRF6O14896 467 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 TLR2O60603 784 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
UBXN1-218ENST00000616865 IFIT1P09914 478 aaKnown RBP18.26■□□□□ 0.51
UBXN1-218ENST00000616865 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBXN1-218ENST00000616865 PPIL2Q13356 520 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 POLA2Q14181 598 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 HHIPL2Q6UWX4 724 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 SIL1Q9H173 461 aa18.26■□□□□ 0.51
UBXN1-218ENST00000616865 BTBD19C9JJ37 291 aa18.25■□□□□ 0.51
UBXN1-218ENST00000616865 SURF6O75683 361 aaKnown RBP18.25■□□□□ 0.51
UBXN1-218ENST00000616865 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
UBXN1-218ENST00000616865 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
UBXN1-218ENST00000616865 DCAF15Q66K64 600 aa18.25■□□□□ 0.51
UBXN1-218ENST00000616865 PA2G4Q9UQ80 394 aaKnown RBP18.25■□□□□ 0.51
UBXN1-218ENST00000616865 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
UBXN1-218ENST00000616865 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
UBXN1-218ENST00000616865 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
UBXN1-218ENST00000616865 SIRT2Q8IXJ6 389 aa18.24■□□□□ 0.51
UBXN1-218ENST00000616865 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
UBXN1-218ENST00000616865 ARHGAP39Q9C0H5 1083 aa18.24■□□□□ 0.51
UBXN1-218ENST00000616865 DOCK2Q92608 1830 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 EYA2O00167 538 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 SLC5A1P13866 664 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 PPATQ06203 517 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 KIF22Q14807 665 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 WDR66Q8TBY9 1149 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 LPIN2Q92539 896 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 CCDC136Q96JN2 1154 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 COPRSQ9NQ92 184 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 AK9Q5TCS8 1911 aa18.23■□□□□ 0.51
UBXN1-218ENST00000616865 HDAC1Q13547 482 aaPredicted RBP18.22■□□□□ 0.51
UBXN1-218ENST00000616865 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
UBXN1-218ENST00000616865 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
UBXN1-218ENST00000616865 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
UBXN1-218ENST00000616865 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
UBXN1-218ENST00000616865 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
UBXN1-218ENST00000616865 APBB1O00213 710 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 CIAO1O76071 339 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 GNRH1P01148 92 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 INPP5BP32019 993 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms