RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 MKRN3Q13064 507 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 EAPPQ56P03 285 aaPredicted RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 SLF2Q8IX21 1173 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 LPIN2Q92539 896 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 VTI1AQ96AJ9 217 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 CALML4Q96GE6 196 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 PGBD1Q96JS3 809 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 CDC42BPAQ5VT25 1732 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 SMTNL1A8MU46 457 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 HSPD1P10809 573 aaKnown RBP4.34□□□□□ -1.72
LTN1-207ENST00000614971 LRSAM1Q6UWE0 723 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 PUS7Q96PZ0 661 aaKnown RBP4.34□□□□□ -1.72
LTN1-207ENST00000614971 DDX19AQ9NUU7 478 aaKnown RBP4.34□□□□□ -1.72
LTN1-207ENST00000614971 ANGEL1Q9UNK9 670 aaKnown RBP4.34□□□□□ -1.72
LTN1-207ENST00000614971 IGSF1Q8N6C5 1336 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 RAD50Q92878 1312 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 SASH1O94885 1247 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 NEFHP12036 1026 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 PDE6AP16499 860 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 GNG11P61952 73 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 STX1AQ16623 288 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 BICD1Q96G01 975 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 CLIC6Q96NY7 704 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 PSMB7Q99436 277 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 ARGLU1Q9NWB6 273 aaPredicted RBP4.34□□□□□ -1.72
LTN1-207ENST00000614971 TMEM63CQ9P1W3 806 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 BLMP54132 1417 aaPredicted RBP4.34□□□□□ -1.72
LTN1-207ENST00000614971 KDM5CP41229 1560 aa4.34□□□□□ -1.72
LTN1-207ENST00000614971 ANKRD62A6NC57 917 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CFBP00751 764 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 SNAP25P60880 206 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 GPS2Q13227 327 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 UBXN4Q92575 508 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 PUS7LQ9H0K6 701 aaKnown RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 VPS16Q9H269 839 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 POLD4Q9HCU8 107 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 KDM5AP29375 1690 aaKnown RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 KIF20AO95235 890 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 IGKV5-2P06315 115 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 SKILP12757 684 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 NSMFQ6X4W1 530 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CCNT1O60563 726 aaKnown RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 MYCLP12524 364 aaPredicted RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 SRRTQ9BXP5 876 aaKnown RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 ZNF521Q96K83 1311 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 H0YIN7 160 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CYP21A2P08686 494 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 SUSD4Q5VX71 490 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 RDH13Q8NBN7 331 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 DYNLL2Q96FJ2 89 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 EXOC1Q9NV70 894 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 DNAI1Q9UI46 699 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 SPDYE3A6NKU9 549 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 BTBD18B2RXH4 712 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CSPG5O95196 566 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 ANAPC15P60006 121 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 SF3A3Q12874 501 aaKnown RBP eCLIP4.33□□□□□ -1.72
LTN1-207ENST00000614971 MIGA2Q7L4E1 593 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 ZBTB38Q8NAP3 1195 aaPredicted RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 KIFC2Q96AC6 838 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CAPZA3Q96KX2 299 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 PSMD1Q99460 953 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CNNM2Q9H8M5 875 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 BIN2Q9UBW5 565 aaPredicted RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 CBFA2T2O43439 604 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 ZBTB7AO95365 584 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 CA8P35219 290 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 SLC16A2P36021 539 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 JADE2Q9NQC1 790 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 BCCIPQ9P287 314 aaKnown RBP eCLIP4.33□□□□□ -1.72
LTN1-207ENST00000614971 NPHP4O75161 1426 aaPredicted RBP4.33□□□□□ -1.72
LTN1-207ENST00000614971 SYNMO15061 1565 aa4.33□□□□□ -1.72
LTN1-207ENST00000614971 NLRP1Q9C000 1473 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 M0R2C6 588 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 BACH1O14867 736 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 NR1I2O75469 434 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 DCAF17Q5H9S7 520 aaPredicted RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 WWC2Q6AWC2 1192 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 SEPT12Q8IYM1 358 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 OSBP2Q969R2 916 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 SNX21Q969T3 373 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 RAB34Q9BZG1 259 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 ZSCAN16Q9H4T2 348 aaPredicted RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 USP40Q9NVE5 1235 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 STK32BQ9NY57 414 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 PODXL2Q9NZ53 605 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 ADGBQ8N7X0 1667 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 ARAP3Q8WWN8 1544 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 HSPA4P34932 840 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 SLC1A4P43007 532 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GSTO1P78417 241 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 PTPN12Q05209 780 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 SPA17Q15506 151 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 KRT40Q6A162 431 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 KSR1Q8IVT5 923 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 NELFCDQ8IXH7 590 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 CCDC12Q8WUD4 166 aaPredicted RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 USP28Q96RU2 1077 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms