RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ZNF589Q86UQ0 364 aaPredicted RBP9.71□□□□□ -0.86
PCDH9-205ENST00000614931 DCPSQ96C86 337 aaKnown RBP9.71□□□□□ -0.86
PCDH9-205ENST00000614931 CAPNS2Q96L46 248 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 MYOZ2Q9NPC6 264 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 ASTN2O75129 1339 aaPredicted RBP9.71□□□□□ -0.86
PCDH9-205ENST00000614931 MYO3BQ8WXR4 1341 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 SALL1Q9NSC2 1324 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 DDX60LQ5H9U9 1706 aaKnown RBP9.7□□□□□ -0.86
PCDH9-205ENST00000614931 ADM5C9JUS6 153 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 M0R2C6 588 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 FOXN1O15353 648 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
PCDH9-205ENST00000614931 SGSM2O43147 1006 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
PCDH9-205ENST00000614931 TTLL5Q6EMB2 1281 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 CYP4F22Q6NT55 531 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 CWC27Q6UX04 472 aaKnown RBP9.7□□□□□ -0.86
PCDH9-205ENST00000614931 ADGRA1Q86SQ6 560 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 OSBP2Q969R2 916 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 ZNF408Q9H9D4 720 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 DIAPH3Q9NSV4 1193 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 ABCF2Q9UG63 623 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 MAST3O60307 1309 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 ZNF532Q9HCE3 1301 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 LAMB1P07942 1786 aa9.7□□□□□ -0.86
PCDH9-205ENST00000614931 FOXP2O15409 715 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 MFAP1P55081 439 aaKnown RBP9.69□□□□□ -0.86
PCDH9-205ENST00000614931 MAP2K1Q02750 393 aaPredicted RBP9.69□□□□□ -0.86
PCDH9-205ENST00000614931 MECOMQ03112 1051 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 MFSD14BQ5SR56 506 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 SLC9C2Q5TAH2 1124 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
PCDH9-205ENST00000614931 SULF1Q8IWU6 871 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 MAGEB6Q8N7X4 407 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 WDR66Q8TBY9 1149 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 NSUN4Q96CB9 384 aaKnown RBP9.69□□□□□ -0.86
PCDH9-205ENST00000614931 PITPNM2Q9BZ72 1349 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 PUS7LQ9H0K6 701 aaKnown RBP9.69□□□□□ -0.86
PCDH9-205ENST00000614931 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 RAI14Q9P0K7 980 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 LRP2BPQ9P2M1 347 aa9.69□□□□□ -0.86
PCDH9-205ENST00000614931 MYH1P12882 1939 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 RAD50Q92878 1312 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 HIP1O00291 1037 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 MAP2K2P36507 400 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 PTH1RQ03431 593 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 UBE3CQ15386 1083 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 NBPF9Q3BBW0 867 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
PCDH9-205ENST00000614931 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 APPBP2Q92624 585 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 AIDAQ96BJ3 306 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 CDCA5Q96FF9 252 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 LSG1Q9H089 658 aaKnown RBP9.68□□□□□ -0.86
PCDH9-205ENST00000614931 PCNTO95613 3336 aa9.68□□□□□ -0.86
PCDH9-205ENST00000614931 CCDC171Q6TFL3 1326 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 WNT10BO00744 389 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 AOC2O75106 756 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 LDHBP07195 334 aaKnown RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 ZFYP08048 801 aaPredicted RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 CYP7A1P22680 504 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 CTCFP49711 727 aaPredicted RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 HUNKP57058 714 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 FKBP1AP62942 108 aaKnown RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 DYNLL1P63167 89 aaKnown RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 MAP3K12Q12852 859 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 TICAM2Q86XR7 235 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 C2orf69Q8N8R5 385 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 ZBED3Q96IU2 234 aaPredicted RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 GBA2Q9HCG7 927 aaPredicted RBP9.67□□□□□ -0.86
PCDH9-205ENST00000614931 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
PCDH9-205ENST00000614931 SIPA1L1O43166 1804 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 F8W031 263 aaPredicted RBP9.66□□□□□ -0.86
PCDH9-205ENST00000614931 GPAA1O43292 621 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 MBD4O95243 580 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 GRM1Q13255 1194 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 MCMDC2Q4G0Z9 681 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 SPTY2D1Q68D10 685 aaPredicted RBP9.66□□□□□ -0.86
PCDH9-205ENST00000614931 NAA16Q6N069 864 aaPredicted RBP9.66□□□□□ -0.86
PCDH9-205ENST00000614931 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 RGMBQ6NW40 437 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 CASC1Q6TDU7 716 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 DZIP1Q86YF9 867 aaKnown RBP9.66□□□□□ -0.86
PCDH9-205ENST00000614931 LCORLQ8N3X6 602 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 MIGA1Q8NAN2 632 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 RUFY2Q8WXA3 655 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 RIOK1Q9BRS2 568 aaKnown RBP9.66□□□□□ -0.86
PCDH9-205ENST00000614931 USP26Q9BXU7 913 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 ARMT1Q9H993 441 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 HDAC9Q9UKV0 1011 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms