RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 GJA5P36382 358 aa28.08■■■□□ 2.09
FAM228B-208ENST00000613899 MAP3K9P80192 1104 aa28.08■■■□□ 2.09
FAM228B-208ENST00000613899 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.08■■■□□ 2.09
FAM228B-208ENST00000613899 ITPRIPQ8IWB1 547 aa28.08■■■□□ 2.09
FAM228B-208ENST00000613899 OPTNQ96CV9 577 aa28.08■■■□□ 2.09
FAM228B-208ENST00000613899 VGLL4Q14135 290 aa28.07■■■□□ 2.08
FAM228B-208ENST00000613899 DCAF15Q66K64 600 aa28.07■■■□□ 2.08
FAM228B-208ENST00000613899 NEUROD6Q96NK8 337 aa28.07■■■□□ 2.08
FAM228B-208ENST00000613899 SPTY2D1Q68D10 685 aaPredicted RBP28.06■■■□□ 2.08
FAM228B-208ENST00000613899 OTUD7BQ6GQQ9 843 aa28.06■■■□□ 2.08
FAM228B-208ENST00000613899 CDC42EP5Q6NZY7 148 aa28.06■■■□□ 2.08
FAM228B-208ENST00000613899 DZIP1Q86YF9 867 aaKnown RBP28.06■■■□□ 2.08
FAM228B-208ENST00000613899 FAM151AQ8WW52 585 aa28.06■■■□□ 2.08
FAM228B-208ENST00000613899 AK9Q5TCS8 1911 aa28.06■■■□□ 2.08
FAM228B-208ENST00000613899 IGF2BP3O00425 579 aaKnown RBP eCLIP28.05■■■□□ 2.08
FAM228B-208ENST00000613899 POLA2Q14181 598 aa28.05■■■□□ 2.08
FAM228B-208ENST00000613899 GORABQ5T7V8 394 aa28.05■■■□□ 2.08
FAM228B-208ENST00000613899 SLF2Q8IX21 1173 aa28.05■■■□□ 2.08
FAM228B-208ENST00000613899 ABCF2Q9UG63 623 aa28.05■■■□□ 2.08
FAM228B-208ENST00000613899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.05■■■□□ 2.08
FAM228B-208ENST00000613899 GAKO14976 1311 aa28.04■■■□□ 2.08
FAM228B-208ENST00000613899 SSH3Q8TE77 659 aa28.04■■■□□ 2.08
FAM228B-208ENST00000613899 WRNIP1Q96S55 665 aa28.04■■■□□ 2.08
FAM228B-208ENST00000613899 TESPA1A2RU30 521 aaPredicted RBP28.03■■■□□ 2.08
FAM228B-208ENST00000613899 FKTNO75072 461 aa28.03■■■□□ 2.08
FAM228B-208ENST00000613899 RLBP1P12271 317 aa28.03■■■□□ 2.08
FAM228B-208ENST00000613899 PKN2Q16513 984 aaKnown RBP28.03■■■□□ 2.08
FAM228B-208ENST00000613899 USP40Q9NVE5 1235 aa28.03■■■□□ 2.08
FAM228B-208ENST00000613899 ATP8B2P98198 1209 aa28.02■■■□□ 2.08
FAM228B-208ENST00000613899 ZNF341Q9BYN7 854 aa28.02■■■□□ 2.08
FAM228B-208ENST00000613899 SPDYE5A6NIY4 337 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 ARID4AP29374 1257 aaPredicted RBP28.01■■■□□ 2.07
FAM228B-208ENST00000613899 GTF2A2P52657 109 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 TCP10Q12799 353 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 NFIAQ12857 509 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 OS9Q13438 667 aaPredicted RBP28.01■■■□□ 2.07
FAM228B-208ENST00000613899 OTUD5Q96G74 571 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 R3HDMLQ9H3Y0 253 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 C1orf115Q9H7X2 142 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 DOCK2Q92608 1830 aa28.01■■■□□ 2.07
FAM228B-208ENST00000613899 ZBTB7BO15156 539 aaPredicted RBP28■■■□□ 2.07
FAM228B-208ENST00000613899 ERICH6Q7L0X2 663 aa28■■■□□ 2.07
FAM228B-208ENST00000613899 SPATA5Q8NB90 893 aa28■■■□□ 2.07
FAM228B-208ENST00000613899 CNKSR2Q8WXI2 1034 aa28■■■□□ 2.07
FAM228B-208ENST00000613899 MS4A4AQ96JQ5 239 aa28■■■□□ 2.07
FAM228B-208ENST00000613899 GPR108Q9NPR9 543 aa28■■■□□ 2.07
FAM228B-208ENST00000613899 SNCAIPQ9Y6H5 919 aa28■■■□□ 2.07
FAM228B-208ENST00000613899 ERO1BQ86YB8 467 aa27.99■■■□□ 2.07
FAM228B-208ENST00000613899 FAM163AQ96GL9 167 aaPredicted RBP27.99■■■□□ 2.07
FAM228B-208ENST00000613899 HMG20BQ9P0W2 317 aa27.99■■■□□ 2.07
FAM228B-208ENST00000613899 FAM198AQ9UFP1 575 aa27.99■■■□□ 2.07
FAM228B-208ENST00000613899 RFX7Q2KHR2 1363 aa27.99■■■□□ 2.07
FAM228B-208ENST00000613899 MROH7-TTC4A0A0A0MT08 1334 aa27.98■■■□□ 2.07
FAM228B-208ENST00000613899 UQCRFS1P1P0C7P4 283 aa27.98■■■□□ 2.07
FAM228B-208ENST00000613899 ZKSCAN4Q969J2 545 aaPredicted RBP27.98■■■□□ 2.07
FAM228B-208ENST00000613899 PTPN18Q99952 460 aa27.98■■■□□ 2.07
FAM228B-208ENST00000613899 IDI2Q9BXS1 227 aa27.98■■■□□ 2.07
FAM228B-208ENST00000613899 SURF6O75683 361 aaKnown RBP27.97■■■□□ 2.07
FAM228B-208ENST00000613899 MIGA2Q7L4E1 593 aa27.97■■■□□ 2.07
FAM228B-208ENST00000613899 CCL15-CCL14A0A0B4J2E2 113 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 ENTPD3O75355 529 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 MS4A1P11836 297 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 BTDP43251 543 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 MECOMQ03112 1051 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 CRHR2Q13324 411 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 CCL15Q16663 113 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 TNNI3KQ59H18 835 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 PI16Q6UXB8 463 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 BRI3BPQ8WY22 251 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 FPGT-TNNI3KV9GXZ4 949 aa27.96■■■□□ 2.07
FAM228B-208ENST00000613899 MCAMP43121 646 aa27.95■■■□□ 2.06
FAM228B-208ENST00000613899 RGS19P49795 217 aa27.95■■■□□ 2.06
FAM228B-208ENST00000613899 RGS3P49796 1198 aa27.95■■■□□ 2.06
FAM228B-208ENST00000613899 GSTO1P78417 241 aa27.95■■■□□ 2.06
FAM228B-208ENST00000613899 PPIL2Q13356 520 aa27.95■■■□□ 2.06
FAM228B-208ENST00000613899 NOP58Q9Y2X3 529 aaKnown RBP27.95■■■□□ 2.06
FAM228B-208ENST00000613899 MAST2Q6P0Q8 1798 aa27.94■■■□□ 2.06
FAM228B-208ENST00000613899 CCDC158Q5M9N0 1113 aa27.94■■■□□ 2.06
FAM228B-208ENST00000613899 ZNF112Q9UJU3 913 aa27.94■■■□□ 2.06
FAM228B-208ENST00000613899 HPS5Q9UPZ3 1129 aa27.94■■■□□ 2.06
FAM228B-208ENST00000613899 LDHCP07864 332 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 CETPP11597 493 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 INPP5BP32019 993 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 PPATQ06203 517 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 SNAPC2Q13487 334 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 TTC39AQ5SRH9 613 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 FBXO46Q6PJ61 603 aaPredicted RBP27.93■■■□□ 2.06
FAM228B-208ENST00000613899 PANK1Q8TE04 598 aa27.93■■■□□ 2.06
FAM228B-208ENST00000613899 GPR75-ASB3A0A0A6YYF3 556 aa27.92■■■□□ 2.06
FAM228B-208ENST00000613899 IRF6O14896 467 aa27.92■■■□□ 2.06
FAM228B-208ENST00000613899 CEP85Q6P2H3 762 aa27.92■■■□□ 2.06
FAM228B-208ENST00000613899 NSUN4Q96CB9 384 aaKnown RBP27.92■■■□□ 2.06
FAM228B-208ENST00000613899 ERO1AQ96HE7 468 aa27.92■■■□□ 2.06
FAM228B-208ENST00000613899 RAI14Q9P0K7 980 aa27.92■■■□□ 2.06
FAM228B-208ENST00000613899 ATRNL1Q5VV63 1379 aa27.91■■■□□ 2.06
FAM228B-208ENST00000613899 WDHD1O75717 1129 aaPredicted RBP27.91■■■□□ 2.06
FAM228B-208ENST00000613899 TAF1CQ15572 869 aaPredicted RBP27.91■■■□□ 2.06
FAM228B-208ENST00000613899 TBC1D9Q6ZT07 1266 aa27.91■■■□□ 2.06
FAM228B-208ENST00000613899 ZFPM1Q8IX07 1006 aa27.91■■■□□ 2.06
FAM228B-208ENST00000613899 ZNF384Q8TF68 577 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms