RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 CYP4F22Q6NT55 531 aa10.07□□□□□ -0.8
PSMB3-208ENST00000613870 DZIP1Q86YF9 867 aaKnown RBP10.07□□□□□ -0.8
PSMB3-208ENST00000613870 ZGPATQ8N5A5 531 aaKnown RBP10.07□□□□□ -0.8
PSMB3-208ENST00000613870 TDRD7Q8NHU6 1098 aaKnown RBP10.07□□□□□ -0.8
PSMB3-208ENST00000613870 DCPSQ96C86 337 aaKnown RBP10.07□□□□□ -0.8
PSMB3-208ENST00000613870 ZNF408Q9H9D4 720 aa10.07□□□□□ -0.8
PSMB3-208ENST00000613870 MYOZ2Q9NPC6 264 aa10.07□□□□□ -0.8
PSMB3-208ENST00000613870 HELLSQ9NRZ9 838 aa10.07□□□□□ -0.8
PSMB3-208ENST00000613870 ZNF532Q9HCE3 1301 aa10.07□□□□□ -0.8
PSMB3-208ENST00000613870 AK9Q5TCS8 1911 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 ADM5C9JUS6 153 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 FOXN1O15353 648 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 CHGBP05060 677 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 LDHBP07195 334 aaKnown RBP10.06□□□□□ -0.8
PSMB3-208ENST00000613870 CYP7A1P22680 504 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 ADD2P35612 726 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 GTF2IP78347 998 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 TTLL5Q6EMB2 1281 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
PSMB3-208ENST00000613870 CCDC129Q6ZRS4 1044 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 KRT26Q7Z3Y9 468 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 APPBP2Q92624 585 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 SEC62Q99442 399 aaKnown RBP10.06□□□□□ -0.8
PSMB3-208ENST00000613870 WBP1LQ9NX94 342 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 GGA3Q9NZ52 723 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 RAD50Q92878 1312 aa10.06□□□□□ -0.8
PSMB3-208ENST00000613870 APPP05067 770 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 IL1R1P14778 569 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 GSTO1P78417 241 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 NBPF9Q3BBW0 867 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 ANGEL2Q5VTE6 544 aaKnown RBP10.05□□□□□ -0.8
PSMB3-208ENST00000613870 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
PSMB3-208ENST00000613870 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 AIDAQ96BJ3 306 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 NOL10Q9BSC4 688 aaKnown RBP10.05□□□□□ -0.8
PSMB3-208ENST00000613870 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
PSMB3-208ENST00000613870 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 MYO3BQ8WXR4 1341 aa10.05□□□□□ -0.8
PSMB3-208ENST00000613870 THSD7BQ9C0I4 1608 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 F8W031 263 aaPredicted RBP10.04□□□□□ -0.8
PSMB3-208ENST00000613870 M0R2C6 588 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 WNT10BO00744 389 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 AOC2O75106 756 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 ECE1P42892 770 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 GRM1Q13255 1194 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 MFSD14BQ5SR56 506 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 ZNF589Q86UQ0 364 aaPredicted RBP10.04□□□□□ -0.8
PSMB3-208ENST00000613870 SULF1Q8IWU6 871 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 OSBP2Q969R2 916 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 HHIPL1Q96JK4 782 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 USP26Q9BXU7 913 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
PSMB3-208ENST00000613870 SCAF8Q9UPN6 1271 aaKnown RBP10.04□□□□□ -0.8
PSMB3-208ENST00000613870 MAST3O60307 1309 aa10.04□□□□□ -0.8
PSMB3-208ENST00000613870 COL1A1P02452 1464 aaPredicted RBP10.04□□□□□ -0.8
PSMB3-208ENST00000613870 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 GPAA1O43292 621 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 MBD4O95243 580 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 LDHCP07864 332 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 PRDX5P30044 214 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
PSMB3-208ENST00000613870 MECOMQ03112 1051 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 PTH1RQ03431 593 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 KIAA0825Q8IV33 1275 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 OGFOD1Q8N543 542 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 MIGA1Q8NAN2 632 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 CDCA5Q96FF9 252 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 IL25Q9H293 177 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 GBA2Q9HCG7 927 aaPredicted RBP10.03□□□□□ -0.8
PSMB3-208ENST00000613870 PITPNM2Q9BZ72 1349 aa10.03□□□□□ -0.8
PSMB3-208ENST00000613870 ZKSCAN1P17029 563 aaPredicted RBP10.02□□□□□ -0.81
PSMB3-208ENST00000613870 MAP2K2P36507 400 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 MMP14P50281 582 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 HUNKP57058 714 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 C2orf69Q8N8R5 385 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 ZBED3Q96IU2 234 aaPredicted RBP10.02□□□□□ -0.81
PSMB3-208ENST00000613870 ZIC5Q96T25 663 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
PSMB3-208ENST00000613870 PUS7LQ9H0K6 701 aaKnown RBP10.02□□□□□ -0.81
PSMB3-208ENST00000613870 ARMT1Q9H993 441 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 RBM8AQ9Y5S9 174 aaKnown RBP10.02□□□□□ -0.81
PSMB3-208ENST00000613870 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
PSMB3-208ENST00000613870 FAM205AQ6ZU69 1335 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 SALL1Q9NSC2 1324 aa10.02□□□□□ -0.81
PSMB3-208ENST00000613870 TCRBV5S4A2TA0A5A2 114 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 BAG3O95817 575 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 CTCFP49711 727 aaPredicted RBP10.01□□□□□ -0.81
PSMB3-208ENST00000613870 RBM5P52756 815 aaKnown RBP eCLIP10.01□□□□□ -0.81
PSMB3-208ENST00000613870 FKBP1AP62942 108 aaKnown RBP10.01□□□□□ -0.81
PSMB3-208ENST00000613870 PRAMEF18Q5VWM3 479 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 NSUN4Q96CB9 384 aaKnown RBP10.01□□□□□ -0.81
PSMB3-208ENST00000613870 DDRGK1Q96HY6 314 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms