RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 RGS16O15492 202 aaPredicted RBP9.78□□□□□ -0.84
TTC28-208ENST00000612946 RNF14Q9UBS8 474 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 ARHGAP10A1A4S6 786 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 MLKLQ8NB16 471 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 TXNDC16Q9P2K2 825 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
TTC28-208ENST00000612946 ETF1P62495 437 aaKnown RBP9.78□□□□□ -0.84
TTC28-208ENST00000612946 MAML3Q96JK9 1138 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 EPS15L1Q9UBC2 864 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 OSBPL9Q96SU4 736 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 BICD1Q96G01 975 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 RNF123Q5XPI4 1314 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 RRAGBQ5VZM2 374 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 TRIM68Q6AZZ1 485 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 CFAP73A6NFT4 308 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 CALML3P27482 149 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 MOV10L1Q9BXT6 1211 aaKnown RBP9.78□□□□□ -0.84
TTC28-208ENST00000612946 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 SLC20A2Q08357 652 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 CCDC84Q86UT8 332 aaPredicted RBP9.78□□□□□ -0.84
TTC28-208ENST00000612946 SSX2IPQ9Y2D8 614 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 MAP3K7O43318 606 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 IGSF3O75054 1194 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 ATP2A3Q93084 1043 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 UHRF1BP1Q6BDS2 1440 aa9.78□□□□□ -0.84
TTC28-208ENST00000612946 FBXO18Q8NFZ0 1043 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 SYNCQ9H7C4 482 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.84
TTC28-208ENST00000612946 TRIM42Q8IWZ5 723 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 NCOA7Q8NI08 942 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 FERMT2Q96AC1 680 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.84
TTC28-208ENST00000612946 CEP126Q9P2H0 1117 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 SYNRGQ9UMZ2 1314 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 RASSF10A6NK89 507 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 HSPA8P11142 646 aaKnown RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 MAN1A1P33908 653 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 BIRC2Q13490 618 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 KIFC3Q9BVG8 833 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 GAS8O95995 478 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 INF2Q27J81 1249 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 CAPRIN2Q6IMN6 1127 aaKnown RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 KRT23Q9C075 422 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 EPSTI1Q96J88 318 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 TBCAO75347 108 aaKnown RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 METAP2P50579 478 aaKnown RBP eCLIP9.77□□□□□ -0.85
TTC28-208ENST00000612946 PSME1Q06323 249 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 KRT71Q3SY84 523 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 GSTA5Q7RTV2 222 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 ORC3Q9UBD5 711 aaPredicted RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 HHATQ5VTY9 493 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 CARD6Q9BX69 1037 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 GDPD2Q9HCC8 539 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 PIK3R4Q99570 1358 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 TCHHQ07283 1943 aa9.77□□□□□ -0.85
TTC28-208ENST00000612946 SCAF11Q99590 1463 aaKnown RBP9.77□□□□□ -0.85
TTC28-208ENST00000612946 DNA2P51530 1060 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 TEX11Q8IYF3 940 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 RASGRF2O14827 1237 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 RAD21O60216 631 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 EPHB4P54760 987 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 IQUBQ8NA54 791 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 XAB2Q9HCS7 855 aaKnown RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 PPP1R12AO14974 1030 aaPredicted RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 CCDC144CPQ8IYA2 1237 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 WWC3Q9ULE0 1092 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 A0A1B0GW55 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4L2P0CJ85 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4L3P0CJ86 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4L4P0CJ87 422 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4L5P0CJ88 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4L6P0CJ89 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4L7P0CJ90 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 ZNF449Q6P9G9 518 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 ANKRD2Q9GZV1 360 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 NAPBQ9H115 298 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 CHCHD3Q9NX63 227 aaKnown RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 DUX4Q9UBX2 424 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 ZNF215Q9UL58 517 aaPredicted RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 IKQ13123 557 aaPredicted RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 PPP4R1Q8TF05 950 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 FAM204AQ9H8W3 233 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 SUFUQ9UMX1 484 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 CLTAP09496 248 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 HEATR3Q7Z4Q2 680 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 ENAHQ8N8S7 591 aaPredicted RBP9.76□□□□□ -0.85
TTC28-208ENST00000612946 MAPKBP1O60336 1514 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 PHBP35232 272 aa9.76□□□□□ -0.85
TTC28-208ENST00000612946 PLCB4Q15147 1175 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms