RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 SPDYE5A6NIY4 337 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 GNAI3P08754 354 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 TIMM10P62072 90 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 INTS3Q68E01 1043 aaKnown RBP18.33■□□□□ 0.52
FDPS-221ENST00000612683 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 EFCC1Q9HA90 598 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 SNCAIPQ9Y6H5 919 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 MYH13Q9UKX3 1938 aa18.33■□□□□ 0.52
FDPS-221ENST00000612683 AK9Q5TCS8 1911 aa18.32■□□□□ 0.52
FDPS-221ENST00000612683 SEMA3EO15041 775 aa18.32■□□□□ 0.52
FDPS-221ENST00000612683 IPO8O15397 1037 aaKnown RBP18.32■□□□□ 0.52
FDPS-221ENST00000612683 ADORA1P30542 326 aa18.32■□□□□ 0.52
FDPS-221ENST00000612683 CCDC102BQ68D86 513 aa18.32■□□□□ 0.52
FDPS-221ENST00000612683 USP40Q9NVE5 1235 aa18.32■□□□□ 0.52
FDPS-221ENST00000612683 PTPN22Q9Y2R2 807 aa18.32■□□□□ 0.52
FDPS-221ENST00000612683 SRGAP3O43295 1099 aa18.31■□□□□ 0.52
FDPS-221ENST00000612683 WDHD1O75717 1129 aaPredicted RBP18.31■□□□□ 0.52
FDPS-221ENST00000612683 CETPP11597 493 aa18.31■□□□□ 0.52
FDPS-221ENST00000612683 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
FDPS-221ENST00000612683 LAMB1P07942 1786 aa18.31■□□□□ 0.52
FDPS-221ENST00000612683 SALL1Q9NSC2 1324 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 IRF6O14896 467 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 INPP5BP32019 993 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 NFIAQ12857 509 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 SNAPC2Q13487 334 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 ARHGEF6Q15052 776 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
FDPS-221ENST00000612683 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
FDPS-221ENST00000612683 AKAP2Q9Y2D5 859 aa18.3■□□□□ 0.52
FDPS-221ENST00000612683 TFCP2Q12800 502 aa18.29■□□□□ 0.52
FDPS-221ENST00000612683 PPIL2Q13356 520 aa18.29■□□□□ 0.52
FDPS-221ENST00000612683 ABCF2Q9UG63 623 aa18.29■□□□□ 0.52
FDPS-221ENST00000612683 PDE4DIPQ5VU43 2346 aa18.29■□□□□ 0.52
FDPS-221ENST00000612683 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
FDPS-221ENST00000612683 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 BTBD19C9JJ37 291 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 BCAR3O75815 825 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 CAP1Q01518 475 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 PPATQ06203 517 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 XAGE2Q96GT9 111 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 NEUROD6Q96NK8 337 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 FAM198AQ9UFP1 575 aa18.28■□□□□ 0.52
FDPS-221ENST00000612683 TRIM27P14373 513 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 RASGRF1Q13972 1273 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 SPTY2D1Q68D10 685 aaPredicted RBP18.27■□□□□ 0.52
FDPS-221ENST00000612683 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 DZIP1Q86YF9 867 aaKnown RBP18.27■□□□□ 0.52
FDPS-221ENST00000612683 ZFPM1Q8IX07 1006 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 ZNF112Q9UJU3 913 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
FDPS-221ENST00000612683 TLR2O60603 784 aa18.26■□□□□ 0.51
FDPS-221ENST00000612683 GNAI2P04899 355 aa18.26■□□□□ 0.51
FDPS-221ENST00000612683 MTX1Q13505 466 aa18.26■□□□□ 0.51
FDPS-221ENST00000612683 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
FDPS-221ENST00000612683 SLF2Q8IX21 1173 aa18.26■□□□□ 0.51
FDPS-221ENST00000612683 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
FDPS-221ENST00000612683 ZCCHC17Q9NP64 241 aaKnown RBP18.26■□□□□ 0.51
FDPS-221ENST00000612683 TNRC18O15417 2968 aaPredicted RBP18.26■□□□□ 0.51
FDPS-221ENST00000612683 POTEFA5A3E0 1075 aa18.25■□□□□ 0.51
FDPS-221ENST00000612683 ZBTB22O15209 634 aa18.25■□□□□ 0.51
FDPS-221ENST00000612683 RGS3P49796 1198 aa18.25■□□□□ 0.51
FDPS-221ENST00000612683 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■■□□ 14.7
FDPS-221ENST00000612683 KIF22Q14807 665 aa18.25■□□□□ 0.51
FDPS-221ENST00000612683 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
FDPS-221ENST00000612683 ZSCAN29Q8IWY8 852 aaPredicted RBP18.25■□□□□ 0.51
FDPS-221ENST00000612683 MYH2Q9UKX2 1941 aa18.24■□□□□ 0.51
FDPS-221ENST00000612683 ENTPD3O75355 529 aa18.24■□□□□ 0.51
FDPS-221ENST00000612683 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
FDPS-221ENST00000612683 FAM163AQ96GL9 167 aaPredicted RBP18.24■□□□□ 0.51
FDPS-221ENST00000612683 IDI2Q9BXS1 227 aa18.24■□□□□ 0.51
FDPS-221ENST00000612683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
FDPS-221ENST00000612683 SLC34A2O95436 690 aa18.23■□□□□ 0.51
FDPS-221ENST00000612683 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
FDPS-221ENST00000612683 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
FDPS-221ENST00000612683 ARMC5Q96C12 935 aa18.23■□□□□ 0.51
FDPS-221ENST00000612683 PTCH2Q9Y6C5 1203 aa18.23■□□□□ 0.51
FDPS-221ENST00000612683 GAKO14976 1311 aa18.23■□□□□ 0.51
FDPS-221ENST00000612683 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
FDPS-221ENST00000612683 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
FDPS-221ENST00000612683 BTDP43251 543 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 PICALMQ13492 652 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 NOL9Q5SY16 702 aaKnown RBP18.22■□□□□ 0.51
FDPS-221ENST00000612683 ANKRD23Q86SG2 305 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 TMEM106CQ9BVX2 250 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 ARHGAP39Q9C0H5 1083 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 KCNH4Q9UQ05 1017 aa18.22■□□□□ 0.51
FDPS-221ENST00000612683 PDHXO00330 501 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 LACTBP83111 547 aaPredicted RBP18.21■□□□□ 0.51
FDPS-221ENST00000612683 MECOMQ03112 1051 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 SLC9C1Q4G0N8 1177 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 ZKSCAN2Q63HK3 967 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 CPA4Q9UI42 421 aa18.21■□□□□ 0.51
FDPS-221ENST00000612683 PHF20L1A8MW92 1017 aa18.2■□□□□ 0.5
FDPS-221ENST00000612683 CXCL11O14625 94 aa18.2■□□□□ 0.5
FDPS-221ENST00000612683 LDHCP07864 332 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms