RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LEMD3Q9Y2U8 911 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 WTIPA6NIX2 430 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-207ENST00000612558 SLC27A2O14975 620 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 SEMA3EO15041 775 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 IDH1O75874 414 aaKnown RBP10.65□□□□□ -0.7
CCDC47-207ENST00000612558 PDE6BP35913 854 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 TMC4Q7Z404 712 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 SLKQ9H2G2 1235 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-207ENST00000612558 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 DENND2AQ9ULE3 1009 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 XDHP47989 1333 aa10.65□□□□□ -0.7
CCDC47-207ENST00000612558 M0R2C6 588 aa10.65□□□□□ -0.71
CCDC47-207ENST00000612558 ITGBL1O95965 494 aaPredicted RBP10.65□□□□□ -0.71
CCDC47-207ENST00000612558 HSP90AA1P07900 732 aaKnown RBP10.65□□□□□ -0.71
CCDC47-207ENST00000612558 HSPD1P10809 573 aaKnown RBP10.65□□□□□ -0.71
CCDC47-207ENST00000612558 PSMA5P28066 241 aa10.65□□□□□ -0.71
CCDC47-207ENST00000612558 HIBADHP31937 336 aaKnown RBP10.65□□□□□ -0.71
CCDC47-207ENST00000612558 KRT32Q14532 448 aa10.65□□□□□ -0.71
CCDC47-207ENST00000612558 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.71
CCDC47-207ENST00000612558 TCRBV5S4A2TA0A5A2 114 aa10.64□□□□□ -0.71
CCDC47-207ENST00000612558 NPR1P16066 1061 aa10.64□□□□□ -0.71
CCDC47-207ENST00000612558 PDE6AP16499 860 aa10.64□□□□□ -0.71
CCDC47-207ENST00000612558 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
CCDC47-207ENST00000612558 PROX2Q3B8N5 592 aa10.64□□□□□ -0.71
CCDC47-207ENST00000612558 JAKMIP1Q96N16 626 aaKnown RBP10.64□□□□□ -0.71
CCDC47-207ENST00000612558 EPAS1Q99814 870 aa10.64□□□□□ -0.71
CCDC47-207ENST00000612558 PUS7LQ9H0K6 701 aaKnown RBP10.64□□□□□ -0.71
CCDC47-207ENST00000612558 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
CCDC47-207ENST00000612558 MYO5AQ9Y4I1 1855 aaKnown RBP10.64□□□□□ -0.71
CCDC47-207ENST00000612558 PDS5AQ29RF7 1337 aaKnown RBP10.63□□□□□ -0.71
CCDC47-207ENST00000612558 ZNF532Q9HCE3 1301 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 IRS2Q9Y4H2 1338 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 GPAA1O43292 621 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 SRGNP10124 158 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 ATP2B4P23634 1241 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 KLRK1P26718 216 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 ADCK5Q3MIX3 580 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 C15orf52Q6ZUT6 534 aaKnown RBP10.63□□□□□ -0.71
CCDC47-207ENST00000612558 RUFY3Q7L099 469 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 DEFB132Q7Z7B7 95 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 CCDC125Q86Z20 511 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 TTC14Q96N46 770 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 CTNNA3Q9UI47 895 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 WWC3Q9ULE0 1092 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 IQSEC3Q9UPP2 1182 aaPredicted RBP10.63□□□□□ -0.71
CCDC47-207ENST00000612558 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 QSER1Q2KHR3 1735 aa10.63□□□□□ -0.71
CCDC47-207ENST00000612558 ANKRD31Q8N7Z5 1873 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 RPAP1Q9BWH6 1393 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-207ENST00000612558 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
CCDC47-207ENST00000612558 ALDH1B1P30837 517 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 GPSM2P81274 684 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 SP8Q8IXZ3 490 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 MAGEB6Q8N7X4 407 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 CHMP5Q9NZZ3 219 aa10.62□□□□□ -0.71
CCDC47-207ENST00000612558 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
CCDC47-207ENST00000612558 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
CCDC47-207ENST00000612558 CYP21A2P08686 494 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 COL9A1P20849 921 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 DDIT3P35638 169 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 TXNRD3Q86VQ6 643 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 AIDAQ96BJ3 306 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 MASTLQ96GX5 879 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 TMX3Q96JJ7 454 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 PDRG1Q9NUG6 133 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 ABCF2Q9UG63 623 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 GGA1Q9UJY5 639 aa10.61□□□□□ -0.71
CCDC47-207ENST00000612558 IGSF3O75054 1194 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 UFL1O94874 794 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 AK2P54819 239 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 BLOC1S2Q6QNY1 142 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 ZNF804AQ7Z570 1209 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 STRBPQ96SI9 672 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 ALDH8A1Q9H2A2 487 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 RAI14Q9P0K7 980 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 ATP6V0A2Q9Y487 856 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 FOXP2O15409 715 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 FGAP02671 866 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 CPA1P15085 419 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 RPS6KB1P23443 525 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 INTS4Q96HW7 963 aaKnown RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 NEK1Q96PY6 1258 aa10.6□□□□□ -0.71
CCDC47-207ENST00000612558 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-207ENST00000612558 TAF6LQ9Y6J9 622 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms