RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SUPT20HL1Q3ZLR7 823 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 CDC42EP5Q6NZY7 148 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 ARMC9Q7Z3E5 817 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 ZNF384Q8TF68 577 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 NSUN4Q96CB9 384 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 TEPSINQ96N21 525 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 RAI14Q9P0K7 980 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 UBE2Q2LH0YL09 131 aa22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 CYP2E1P05181 493 aaPredicted RBP22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 SLC10A3P09131 477 aa22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 ZNF157P51786 506 aaPredicted RBP22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 FAM83AQ86UY5 434 aa22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 FAM163AQ96GL9 167 aaPredicted RBP22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 LRRCC1Q9C099 1032 aa22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 LRP2BPQ9P2M1 347 aa22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 ANGEL1Q9UNK9 670 aaKnown RBP22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 FZD1Q9UP38 647 aa22.1■■□□□ 1.13
SEMA3B-211ENST00000612509 FAM155AB1AL88 458 aaPredicted RBP22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 BTDP43251 543 aa22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 GSTO1P78417 241 aa22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 RASAL3Q86YV0 1011 aa22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 DCTPP1Q9H773 170 aa22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 USP40Q9NVE5 1235 aa22.09■■□□□ 1.13
SEMA3B-211ENST00000612509 PPP1R12BO60237 982 aaPredicted RBP22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 MAP2K2P36507 400 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 NFIAQ12857 509 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 NOGQ13253 232 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 MAP3K11Q16584 847 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 CCDC102AQ96A19 550 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 PIH1D3Q9NQM4 214 aaKnown RBP22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 PCNTO95613 3336 aa22.08■■□□□ 1.13
SEMA3B-211ENST00000612509 SMARCA5O60264 1052 aaPredicted RBP22.07■■□□□ 1.12
SEMA3B-211ENST00000612509 GPR75-ASB3A0A0A6YYF3 556 aa22.06■■□□□ 1.12
SEMA3B-211ENST00000612509 LDHCP07864 332 aa22.06■■□□□ 1.12
SEMA3B-211ENST00000612509 MAP2K1Q02750 393 aaPredicted RBP22.06■■□□□ 1.12
SEMA3B-211ENST00000612509 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.06■■□□□ 1.12
SEMA3B-211ENST00000612509 IGSF3O75054 1194 aa22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 IREB2P48200 963 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 LDLRAD1Q5T700 205 aa22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 NAA16Q6N069 864 aaPredicted RBP22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 FAM151AQ8WW52 585 aa22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 ZIC5Q96T25 663 aa22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 WBP1LQ9NX94 342 aa22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 FAM198AQ9UFP1 575 aa22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 SUPT16HQ9Y5B9 1047 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-211ENST00000612509 RHBDL3P58872 404 aa22.04■■□□□ 1.12
SEMA3B-211ENST00000612509 TCP10Q12799 353 aa22.04■■□□□ 1.12
SEMA3B-211ENST00000612509 AIDAQ96BJ3 306 aa22.04■■□□□ 1.12
SEMA3B-211ENST00000612509 IDI2Q9BXS1 227 aa22.04■■□□□ 1.12
SEMA3B-211ENST00000612509 ANTXR1Q9H6X2 564 aa22.04■■□□□ 1.12
SEMA3B-211ENST00000612509 AK9Q5TCS8 1911 aa22.04■■□□□ 1.12
SEMA3B-211ENST00000612509 LAMB1P07942 1786 aa22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 USP2O75604 605 aaPredicted RBP22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 WDHD1O75717 1129 aaPredicted RBP22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 IDH1O75874 414 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 RGS3P49796 1198 aa22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 AAMPQ13685 434 aa22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 CDK5RAP2Q96SN8 1893 aa22.03■■□□□ 1.12
SEMA3B-211ENST00000612509 FOCADQ5VW36 1801 aa22.02■■□□□ 1.12
SEMA3B-211ENST00000612509 ADGRA1Q86SQ6 560 aa22.02■■□□□ 1.12
SEMA3B-211ENST00000612509 DNAJC2Q99543 621 aaKnown RBP22.02■■□□□ 1.12
SEMA3B-211ENST00000612509 UNCXA6NJT0 531 aa22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 FOXN1O15353 648 aa22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 ENTPD3O75355 529 aa22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 KIF23Q02241 960 aaPredicted RBP22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 EXOC6Q8TAG9 804 aa22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 HOOK2Q96ED9 719 aa22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 CLMNQ96JQ2 1002 aa22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 NOL10Q9BSC4 688 aaKnown RBP22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 DDX4Q9NQI0 724 aaKnown RBP22.01■■□□□ 1.11
SEMA3B-211ENST00000612509 MAP4K4O95819 1239 aaPredicted RBP22■■□□□ 1.11
SEMA3B-211ENST00000612509 ATP5JP18859 108 aa22■■□□□ 1.11
SEMA3B-211ENST00000612509 PICALMQ13492 652 aa22■■□□□ 1.11
SEMA3B-211ENST00000612509 HDAC1Q13547 482 aaPredicted RBP22■■□□□ 1.11
SEMA3B-211ENST00000612509 TTF1Q15361 905 aaPredicted RBP22■■□□□ 1.11
SEMA3B-211ENST00000612509 ZFPM1Q8IX07 1006 aa22■■□□□ 1.11
SEMA3B-211ENST00000612509 ANKRD13AQ8IZ07 590 aa22■■□□□ 1.11
SEMA3B-211ENST00000612509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22■■□□□ 1.11
SEMA3B-211ENST00000612509 AATFQ9NY61 560 aaKnown RBP eCLIP22■■□□□ 1.11
SEMA3B-211ENST00000612509 ATRNL1Q5VV63 1379 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 COL2A1P02458 1487 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 GOLIM4O00461 696 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 MAP3K12Q12852 859 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 DCAF15Q66K64 600 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 MAGEB6Q8N7X4 407 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 BEGAINQ9BUH8 593 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 BOLA2Q9H3K6 86 aa21.99■■□□□ 1.11
SEMA3B-211ENST00000612509 MYH7P12883 1935 aa21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 BAG3O95817 575 aa21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 CYP7A1P22680 504 aa21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 MKRN3Q13064 507 aaKnown RBP21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 TEX11Q8IYF3 940 aa21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 SH3RF3Q8TEJ3 882 aaPredicted RBP21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 HAUS7Q99871 368 aa21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.98■■□□□ 1.11
SEMA3B-211ENST00000612509 NPM3O75607 178 aaKnown RBP21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 PLCG2P16885 1265 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms