RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 ZBED9Q6R2W3 1325 aa21.47■■□□□ 1.03
PRKN-209ENST00000612485 OTOFQ9HC10 1997 aa21.47■■□□□ 1.03
PRKN-209ENST00000612485 FKTNO75072 461 aa21.46■■□□□ 1.03
PRKN-209ENST00000612485 VGLL4Q14135 290 aa21.46■■□□□ 1.03
PRKN-209ENST00000612485 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
PRKN-209ENST00000612485 FAM151AQ8WW52 585 aa21.46■■□□□ 1.03
PRKN-209ENST00000612485 LAMB1P07942 1786 aa21.46■■□□□ 1.03
PRKN-209ENST00000612485 PNMA6EA0A0J9YXQ4 647 aa21.45■■□□□ 1.02
PRKN-209ENST00000612485 TESPA1A2RU30 521 aaPredicted RBP21.45■■□□□ 1.02
PRKN-209ENST00000612485 IGF2BP3O00425 579 aaKnown RBP eCLIP21.45■■□□□ 1.02
PRKN-209ENST00000612485 RASGRF1Q13972 1273 aa21.45■■□□□ 1.02
PRKN-209ENST00000612485 CDC42EP5Q6NZY7 148 aa21.45■■□□□ 1.02
PRKN-209ENST00000612485 NEUROD6Q96NK8 337 aa21.45■■□□□ 1.02
PRKN-209ENST00000612485 SPTY2D1Q68D10 685 aaPredicted RBP21.44■■□□□ 1.02
PRKN-209ENST00000612485 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
PRKN-209ENST00000612485 SLF2Q8IX21 1173 aa21.44■■□□□ 1.02
PRKN-209ENST00000612485 WRNIP1Q96S55 665 aa21.44■■□□□ 1.02
PRKN-209ENST00000612485 R3HDMLQ9H3Y0 253 aa21.44■■□□□ 1.02
PRKN-209ENST00000612485 USP40Q9NVE5 1235 aa21.44■■□□□ 1.02
PRKN-209ENST00000612485 ABCF2Q9UG63 623 aa21.44■■□□□ 1.02
PRKN-209ENST00000612485 RGS19P49795 217 aa21.43■■□□□ 1.02
PRKN-209ENST00000612485 GORABQ5T7V8 394 aa21.43■■□□□ 1.02
PRKN-209ENST00000612485 ZNF341Q9BYN7 854 aa21.43■■□□□ 1.02
PRKN-209ENST00000612485 GTF2A2P52657 109 aa21.42■■□□□ 1.02
PRKN-209ENST00000612485 ITPRIPQ8IWB1 547 aa21.42■■□□□ 1.02
PRKN-209ENST00000612485 OTUD5Q96G74 571 aa21.42■■□□□ 1.02
PRKN-209ENST00000612485 GAKO14976 1311 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 SPDYE5A6NIY4 337 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 TCP10Q12799 353 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 NFIAQ12857 509 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 POLA2Q14181 598 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 ERO1BQ86YB8 467 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 CNKSR2Q8WXI2 1034 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 MS4A4AQ96JQ5 239 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 PTPN18Q99952 460 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 SNCAIPQ9Y6H5 919 aa21.41■■□□□ 1.02
PRKN-209ENST00000612485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.41■■□□□ 1.02
PRKN-209ENST00000612485 ERICH6Q7L0X2 663 aa21.4■■□□□ 1.02
PRKN-209ENST00000612485 MIGA2Q7L4E1 593 aa21.4■■□□□ 1.02
PRKN-209ENST00000612485 SSH3Q8TE77 659 aa21.4■■□□□ 1.02
PRKN-209ENST00000612485 ZKSCAN4Q969J2 545 aaPredicted RBP21.4■■□□□ 1.02
PRKN-209ENST00000612485 FAM163AQ96GL9 167 aaPredicted RBP21.4■■□□□ 1.02
PRKN-209ENST00000612485 FAM198AQ9UFP1 575 aa21.4■■□□□ 1.02
PRKN-209ENST00000612485 CCL15-CCL14A0A0B4J2E2 113 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 MLLT1Q03111 559 aaPredicted RBP21.39■■□□□ 1.01
PRKN-209ENST00000612485 CRHR2Q13324 411 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.01
PRKN-209ENST00000612485 CCL15Q16663 113 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 SPATA5Q8NB90 893 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 BRI3BPQ8WY22 251 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 HMG20BQ9P0W2 317 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.01
PRKN-209ENST00000612485 ZBTB7BO15156 539 aaPredicted RBP21.38■■□□□ 1.01
PRKN-209ENST00000612485 UQCRFS1P1P0C7P4 283 aa21.38■■□□□ 1.01
PRKN-209ENST00000612485 RLBP1P12271 317 aa21.38■■□□□ 1.01
PRKN-209ENST00000612485 ARID4AP29374 1257 aaPredicted RBP21.38■■□□□ 1.01
PRKN-209ENST00000612485 FBXO46Q6PJ61 603 aaPredicted RBP21.38■■□□□ 1.01
PRKN-209ENST00000612485 IDI2Q9BXS1 227 aa21.38■■□□□ 1.01
PRKN-209ENST00000612485 C1orf115Q9H7X2 142 aa21.38■■□□□ 1.01
PRKN-209ENST00000612485 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
PRKN-209ENST00000612485 MYH2Q9UKX2 1941 aa21.37■■□□□ 1.01
PRKN-209ENST00000612485 MROH7-TTC4A0A0A0MT08 1334 aa21.37■■□□□ 1.01
PRKN-209ENST00000612485 ENTPD3O75355 529 aa21.37■■□□□ 1.01
PRKN-209ENST00000612485 PPIL2Q13356 520 aa21.37■■□□□ 1.01
PRKN-209ENST00000612485 ERO1AQ96HE7 468 aa21.37■■□□□ 1.01
PRKN-209ENST00000612485 SURF6O75683 361 aaKnown RBP21.36■■□□□ 1.01
PRKN-209ENST00000612485 WDHD1O75717 1129 aaPredicted RBP21.36■■□□□ 1.01
PRKN-209ENST00000612485 CETPP11597 493 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 BTDP43251 543 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 RGS3P49796 1198 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 GSTO1P78417 241 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 MECOMQ03112 1051 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 PPATQ06203 517 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 SNAPC2Q13487 334 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 ZNF112Q9UJU3 913 aa21.36■■□□□ 1.01
PRKN-209ENST00000612485 LDHCP07864 332 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 INPP5BP32019 993 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 TAF1CQ15572 869 aaPredicted RBP21.35■■□□□ 1.01
PRKN-209ENST00000612485 TNNI3KQ59H18 835 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 ZFYVE28Q9HCC9 887 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 TRIM17Q9Y577 477 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 FPGT-TNNI3KV9GXZ4 949 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 AK9Q5TCS8 1911 aa21.35■■□□□ 1.01
PRKN-209ENST00000612485 GPR75-ASB3A0A0A6YYF3 556 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 IRF6O14896 467 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 MS4A1P11836 297 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 SP3Q02447 781 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 CCDC158Q5M9N0 1113 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 TTC39AQ5SRH9 613 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 PI16Q6UXB8 463 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 ZFPM1Q8IX07 1006 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 ZCCHC17Q9NP64 241 aaKnown RBP21.34■■□□□ 1.01
PRKN-209ENST00000612485 RAI14Q9P0K7 980 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 NOP58Q9Y2X3 529 aaKnown RBP21.34■■□□□ 1.01
PRKN-209ENST00000612485 RFX7Q2KHR2 1363 aa21.34■■□□□ 1.01
PRKN-209ENST00000612485 MAP4K4O95819 1239 aaPredicted RBP21.33■■□□□ 1.01
PRKN-209ENST00000612485 MCAMP43121 646 aa21.33■■□□□ 1.01
PRKN-209ENST00000612485 SOX10P56693 466 aa21.33■■□□□ 1.01
PRKN-209ENST00000612485 NOL9Q5SY16 702 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms