RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PDE8AO60658 829 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 BCRP11274 1271 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 SNAPC2Q13487 334 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 TJAP1Q5JTD0 557 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ERO1BQ86YB8 467 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 SEMA6BQ9H3T3 888 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CSADQ9Y600 493 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 DOCK3Q8IZD9 2030 aa9.37□□□□□ -0.91
PTCHD3P1-201ENST00000612350 F8W031 263 aaPredicted RBP9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 FLT3LGP49771 235 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 FCGRTP55899 365 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 IRF5Q13568 498 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ANKRD23Q86SG2 305 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ZNF70Q9UC06 446 aaPredicted RBP9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 LEMD3Q9Y2U8 911 aa9.36□□□□□ -0.91
PTCHD3P1-201ENST00000612350 PDHXO00330 501 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 PCCAP05165 728 aaPredicted RBP9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 MDM2Q00987 491 aaPredicted RBP9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 PPIL2Q13356 520 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 MOGSQ13724 837 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CNGB1Q14028 1251 aaPredicted RBP9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 MYLIPQ8WY64 445 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
PTCHD3P1-201ENST00000612350 DDX60LQ5H9U9 1706 aaKnown RBP9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 TNFAIP1Q13829 316 aa9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CDC5LQ99459 802 aaKnown RBP9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 TMEM39BQ9GZU3 492 aa9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 TTYH1Q9H313 450 aaPredicted RBP9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 BABAM1Q9NWV8 329 aa9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ARAP2Q8WZ64 1704 aa9.34□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PFASO15067 1338 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 NCOR1O75376 2440 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PSEN1P49768 467 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 FKBP1AP62942 108 aaKnown RBP9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PPATQ06203 517 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 TDRD3Q9H7E2 651 aaKnown RBP9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 SPEF2Q9C093 1822 aa9.33□□□□□ -0.92
PTCHD3P1-201ENST00000612350 CYP2C8P10632 490 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 FOSL2P15408 326 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 RBM5P52756 815 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 USP38Q8NB14 1042 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 TTLL11Q8NHH1 800 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 SNX27Q96L92 541 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 GREM2Q9H772 168 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 OGDHLQ9ULD0 1010 aa9.32□□□□□ -0.92
PTCHD3P1-201ENST00000612350 MUC3AQ02505 3323 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 TCP10L2B9ZVM9 353 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 COL6A1P12109 1028 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 IL1R1P14778 569 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 CTSWP56202 376 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 GPAT2Q6NUI2 795 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 CCDC191Q8NCU4 936 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 WRNIP1Q96S55 665 aa9.31□□□□□ -0.92
PTCHD3P1-201ENST00000612350 TNPO2O14787 897 aaKnown RBP9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 LRRC26Q2I0M4 334 aa9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 C15orf52Q6ZUT6 534 aaKnown RBP9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 DZIP1LQ8IYY4 767 aaKnown RBP9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PARK7Q99497 189 aaKnown RBP9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 MYD88Q99836 296 aa9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 ANKRD2Q9GZV1 360 aa9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
PTCHD3P1-201ENST00000612350 EYSQ5T1H1 3165 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PRUNE2Q8WUY3 3088 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 SNAP23O00161 211 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 NEFMP07197 916 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 INPP5BP32019 993 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 TNNI2P48788 182 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 TRIM32Q13049 653 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 HYPKQ9NX55 129 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 SERPINA10Q9UK55 444 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 JAG2Q9Y219 1238 aa9.29□□□□□ -0.92
PTCHD3P1-201ENST00000612350 PIEZO1Q92508 2521 aa9.28□□□□□ -0.92
PTCHD3P1-201ENST00000612350 HMGCRP04035 888 aa9.28□□□□□ -0.92
PTCHD3P1-201ENST00000612350 SHHQ15465 462 aa9.28□□□□□ -0.92
PTCHD3P1-201ENST00000612350 HMX1Q9NP08 348 aaPredicted RBP9.28□□□□□ -0.92
PTCHD3P1-201ENST00000612350 MYH3P11055 1940 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms