RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OGFRQ9NZT2 677 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 YEATS4O95619 227 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 GSDMDP57764 484 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 CPLX3Q8WVH0 158 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL6A1-207ENST00000612273 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 C5P01031 1676 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 NEDD4P46934 1319 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 SMIM22K7EJ46 135 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 NCAPHQ15003 741 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
COL6A1-207ENST00000612273 GPR108Q9NPR9 543 aa16.22■□□□□ 0.19
COL6A1-207ENST00000612273 NRDCO43847 1150 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 CASP1P29466 404 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 MAGEB6Q8N7X4 407 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 ADKP55263 362 aaKnown RBP16.21■□□□□ 0.19
COL6A1-207ENST00000612273 NR5A1Q13285 461 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 ARHGAP29Q52LW3 1261 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.19
COL6A1-207ENST00000612273 CMA1P23946 247 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 PDE4BQ07343 736 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 NAPBQ9H115 298 aa16.21■□□□□ 0.19
COL6A1-207ENST00000612273 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 RANBP6O60518 1105 aaKnown RBP16.2■□□□□ 0.18
COL6A1-207ENST00000612273 MBD4O95243 580 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 ZFYP08048 801 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-207ENST00000612273 TOP1P11387 765 aaKnown RBP16.2■□□□□ 0.18
COL6A1-207ENST00000612273 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 ATL3Q6DD88 541 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 MINDY4BA8MYZ0 360 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-207ENST00000612273 STX17P56962 302 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 OLFM4Q6UX06 510 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 STAMQ92783 540 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 DESI2Q9BSY9 194 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 ZSWIM5Q9P217 1185 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 DDX41Q9UJV9 622 aaKnown RBP16.2■□□□□ 0.18
COL6A1-207ENST00000612273 PDE6AP16499 860 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 USP49Q70CQ1 688 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-207ENST00000612273 KCNH3Q9ULD8 1083 aa16.2■□□□□ 0.18
COL6A1-207ENST00000612273 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 IL2RBP14784 551 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 FEZ1Q99689 392 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 ANKRD18BA2A2Z9 1011 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
COL6A1-207ENST00000612273 CIAO1O76071 339 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 ADD2P35612 726 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 TDO2P48775 406 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 MNS1Q8NEH6 495 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 RFX7Q2KHR2 1363 aa16.19■□□□□ 0.18
COL6A1-207ENST00000612273 POLR3GO15318 223 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-207ENST00000612273 AFMP43652 599 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 MYL5Q02045 173 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 KARSQ15046 597 aaKnown RBP16.18■□□□□ 0.18
COL6A1-207ENST00000612273 METTL16Q86W50 562 aaKnown RBP16.18■□□□□ 0.18
COL6A1-207ENST00000612273 ERO1AQ96HE7 468 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 CARD6Q9BX69 1037 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 CCDC150Q8NCX0 1101 aa16.18■□□□□ 0.18
COL6A1-207ENST00000612273 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-207ENST00000612273 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
COL6A1-207ENST00000612273 SEC31AO94979 1220 aaKnown RBP16.17■□□□□ 0.18
COL6A1-207ENST00000612273 DIS3L2Q8IYB7 885 aaKnown RBP16.17■□□□□ 0.18
COL6A1-207ENST00000612273 PIGBQ92521 554 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 PRDM1O75626 825 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 KRT222Q8N1A0 295 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
COL6A1-207ENST00000612273 GTPBP4Q9BZE4 634 aaKnown RBP16.17■□□□□ 0.18
COL6A1-207ENST00000612273 HSD3B7Q9H2F3 369 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 SEC31BQ9NQW1 1179 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 ZBTB1Q9Y2K1 713 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 RIPOR2Q9Y4F9 1068 aa16.17■□□□□ 0.18
COL6A1-207ENST00000612273 ZMYM6O95789 1325 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 SSRP1Q08945 709 aaKnown RBP16.16■□□□□ 0.18
COL6A1-207ENST00000612273 JMYQ8N9B5 988 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 UBXN4Q92575 508 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 IRX2Q9BZI1 471 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-207ENST00000612273 SERTAD1Q9UHV2 236 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 BMP6P22004 513 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 GNG11P61952 73 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 SMYD4Q8IYR2 804 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-207ENST00000612273 ZNF446Q9NWS9 450 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 NFE2L3Q9Y4A8 694 aa16.16■□□□□ 0.18
COL6A1-207ENST00000612273 MRC1P22897 1456 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms