RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 RAB11FIP3O75154 756 aa15.65■□□□□ 0.1
CD9-212ENST00000610354 CYP2E1P05181 493 aaPredicted RBP15.65■□□□□ 0.1
CD9-212ENST00000610354 HSPA1AP0DMV8 641 aaKnown RBP15.65■□□□□ 0.1
CD9-212ENST00000610354 HSPA1BP0DMV9 641 aaKnown RBP15.65■□□□□ 0.1
CD9-212ENST00000610354 ZAP70P43403 619 aa15.65■□□□□ 0.1
CD9-212ENST00000610354 FKBP1BP68106 108 aa15.65■□□□□ 0.1
CD9-212ENST00000610354 MECOMQ03112 1051 aa15.65■□□□□ 0.1
CD9-212ENST00000610354 ZGPATQ8N5A5 531 aaKnown RBP15.65■□□□□ 0.1
CD9-212ENST00000610354 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
CD9-212ENST00000610354 TMEM39BQ9GZU3 492 aa15.65■□□□□ 0.1
CD9-212ENST00000610354 SMARCA5O60264 1052 aaPredicted RBP15.64■□□□□ 0.09
CD9-212ENST00000610354 ECE1P42892 770 aa15.64■□□□□ 0.09
CD9-212ENST00000610354 LDLRAD1Q5T700 205 aa15.64■□□□□ 0.09
CD9-212ENST00000610354 SPTY2D1Q68D10 685 aaPredicted RBP15.64■□□□□ 0.09
CD9-212ENST00000610354 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
CD9-212ENST00000610354 NSUN4Q96CB9 384 aaKnown RBP15.64■□□□□ 0.09
CD9-212ENST00000610354 DCTPP1Q9H773 170 aa15.64■□□□□ 0.09
CD9-212ENST00000610354 PIH1D3Q9NQM4 214 aaKnown RBP15.64■□□□□ 0.09
CD9-212ENST00000610354 NDUFB9Q9Y6M9 179 aa15.64■□□□□ 0.09
CD9-212ENST00000610354 USP2O75604 605 aaPredicted RBP15.63■□□□□ 0.09
CD9-212ENST00000610354 SLC10A3P09131 477 aa15.63■□□□□ 0.09
CD9-212ENST00000610354 ZNF157P51786 506 aaPredicted RBP15.63■□□□□ 0.09
CD9-212ENST00000610354 NFIAQ12857 509 aa15.63■□□□□ 0.09
CD9-212ENST00000610354 FKBP1CQ5VVH2 108 aa15.63■□□□□ 0.09
CD9-212ENST00000610354 DZIP1Q86YF9 867 aaKnown RBP15.63■□□□□ 0.09
CD9-212ENST00000610354 WBP1LQ9NX94 342 aa15.63■□□□□ 0.09
CD9-212ENST00000610354 FAM198AQ9UFP1 575 aa15.63■□□□□ 0.09
CD9-212ENST00000610354 MROH7-TTC4A0A0A0MT08 1334 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 NF2P35240 595 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 TTLL12Q14166 644 aaPredicted RBP15.62■□□□□ 0.09
CD9-212ENST00000610354 MAP3K11Q16584 847 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 FAM83AQ86UY5 434 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 RASAL3Q86YV0 1011 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 ZFPM1Q8IX07 1006 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
CD9-212ENST00000610354 ANTXR1Q9H6X2 564 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 USP40Q9NVE5 1235 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 RAI14Q9P0K7 980 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 ANGEL1Q9UNK9 670 aaKnown RBP15.62■□□□□ 0.09
CD9-212ENST00000610354 OTOFQ9HC10 1997 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 DOCK2Q92608 1830 aa15.62■□□□□ 0.09
CD9-212ENST00000610354 RFX7Q2KHR2 1363 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 MAST2Q6P0Q8 1798 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 GPR75-ASB3A0A0A6YYF3 556 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 MAP2K2P36507 400 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 BTDP43251 543 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 RHBDL3P58872 404 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 SUPT20HL1Q3ZLR7 823 aa15.61■□□□□ 0.09
CD9-212ENST00000610354 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
CD9-212ENST00000610354 FOXN1O15353 648 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 TNNI2P48788 182 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 ARMC9Q7Z3E5 817 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 ADGRA1Q86SQ6 560 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 FAM151AQ8WW52 585 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 CCDC102AQ96A19 550 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 CLMNQ96JQ2 1002 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 LRRCC1Q9C099 1032 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 DDX4Q9NQI0 724 aaKnown RBP15.6■□□□□ 0.09
CD9-212ENST00000610354 TMOD2Q9NZR1 351 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 LRP2BPQ9P2M1 347 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 AK9Q5TCS8 1911 aa15.6■□□□□ 0.09
CD9-212ENST00000610354 WDHD1O75717 1129 aaPredicted RBP15.59■□□□□ 0.09
CD9-212ENST00000610354 KIF23Q02241 960 aaPredicted RBP15.59■□□□□ 0.09
CD9-212ENST00000610354 NOGQ13253 232 aa15.59■□□□□ 0.09
CD9-212ENST00000610354 IDI2Q9BXS1 227 aa15.59■□□□□ 0.09
CD9-212ENST00000610354 CDK5RAP2Q96SN8 1893 aa15.59■□□□□ 0.09
CD9-212ENST00000610354 RPAP1Q9BWH6 1393 aaPredicted RBP15.58■□□□□ 0.08
CD9-212ENST00000610354 IFIT2P09913 472 aaKnown RBP15.58■□□□□ 0.08
CD9-212ENST00000610354 RGS3P49796 1198 aa15.58■□□□□ 0.08
CD9-212ENST00000610354 TCP10Q12799 353 aa15.58■□□□□ 0.08
CD9-212ENST00000610354 SH3BP5LQ7L8J4 393 aa15.58■□□□□ 0.08
CD9-212ENST00000610354 SLF2Q8IX21 1173 aa15.58■□□□□ 0.08
CD9-212ENST00000610354 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.08
CD9-212ENST00000610354 PPP1R12BO60237 982 aaPredicted RBP15.57■□□□□ 0.08
CD9-212ENST00000610354 LDHCP07864 332 aa15.57■□□□□ 0.08
CD9-212ENST00000610354 GSTO1P78417 241 aa15.57■□□□□ 0.08
CD9-212ENST00000610354 MAP2K1Q02750 393 aaPredicted RBP15.57■□□□□ 0.08
CD9-212ENST00000610354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
CD9-212ENST00000610354 EDC3Q96F86 508 aaKnown RBP15.57■□□□□ 0.08
CD9-212ENST00000610354 CSRNP1Q96S65 589 aa15.57■□□□□ 0.08
CD9-212ENST00000610354 SLURP2P0DP57 97 aa15.56■□□□□ 0.08
CD9-212ENST00000610354 GJA5P36382 358 aa15.56■□□□□ 0.08
CD9-212ENST00000610354 NAA16Q6N069 864 aaPredicted RBP15.56■□□□□ 0.08
CD9-212ENST00000610354 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.56■□□□□ 0.08
CD9-212ENST00000610354 SH3RF3Q8TEJ3 882 aaPredicted RBP15.56■□□□□ 0.08
CD9-212ENST00000610354 ATRNL1Q5VV63 1379 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 LAMB1P07942 1786 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 DDTLA6NHG4 134 aaPredicted RBP15.55■□□□□ 0.08
CD9-212ENST00000610354 ENTPD3O75355 529 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 HSPA8P11142 646 aaKnown RBP15.55■□□□□ 0.08
CD9-212ENST00000610354 ATP5JP18859 108 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 IREB2P48200 963 aaKnown RBP15.55■□□□□ 0.08
CD9-212ENST00000610354 PPP4CP60510 307 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
CD9-212ENST00000610354 MIGA2Q7L4E1 593 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
CD9-212ENST00000610354 BOLA2Q9H3K6 86 aa15.55■□□□□ 0.08
CD9-212ENST00000610354 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms