RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 GLIS2Q9BZE0 524 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 ZNF330Q9Y3S2 320 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 POLR2AP24928 1970 aaKnown RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 RAD50Q92878 1312 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 RPAP1Q9BWH6 1393 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 ANKRD36CQ5JPF3 1778 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 BTBD11A6QL63 1104 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 KCNQ3O43525 872 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 F13A1P00488 732 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 GRM1Q13255 1194 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 ANKRD1Q15327 319 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 SYCP1Q15431 976 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 HLFQ16534 295 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 SLC10A5Q5PT55 438 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 DMRTA1Q5VZB9 504 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 MCM10Q7L590 875 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 DPF2Q92785 391 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 TM6SF1Q9BZW5 370 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 RNF186Q9NXI6 227 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 EXOC6BQ9Y2D4 811 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 ATP6V0A2Q9Y487 856 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 TTC41PQ6P2S7 1318 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 CCDC171Q6TFL3 1326 aa8.97□□□□□ -0.97
LMBR1-221ENST00000609774 PPIP5K2O43314 1243 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 GLRX3O76003 335 aaKnown RBP8.96□□□□□ -0.98
LMBR1-221ENST00000609774 ZKSCAN1P17029 563 aaPredicted RBP8.96□□□□□ -0.98
LMBR1-221ENST00000609774 PSMA5P28066 241 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 PBX2P40425 430 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 PSEN2P49810 448 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 GMPSP49915 693 aaPredicted RBP8.96□□□□□ -0.98
LMBR1-221ENST00000609774 SOX10P56693 466 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 HUNKP57058 714 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 FLIIQ13045 1269 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 TNIP1Q15025 636 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 VPS53Q5VIR6 699 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 TAF3Q5VWG9 929 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.96□□□□□ -0.98
LMBR1-221ENST00000609774 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 SSH3Q8TE77 659 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 RBM17Q96I25 401 aaKnown RBP8.96□□□□□ -0.98
LMBR1-221ENST00000609774 FEZ1Q99689 392 aa8.96□□□□□ -0.98
LMBR1-221ENST00000609774 NSFL1CQ9UNZ2 370 aaKnown RBP8.96□□□□□ -0.98
LMBR1-221ENST00000609774 LRRC37AA6NMS7 1700 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 GOLGA6L4A6NEF3 574 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 PPEF1O14829 653 aaPredicted RBP8.95□□□□□ -0.98
LMBR1-221ENST00000609774 SGSM2O43147 1006 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 BBOX1O75936 387 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 KIF20AO95235 890 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 KRT85P78386 507 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 KIF23Q02241 960 aaPredicted RBP8.95□□□□□ -0.98
LMBR1-221ENST00000609774 DMTNQ08495 405 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 DHX8Q14562 1220 aaKnown RBP8.95□□□□□ -0.98
LMBR1-221ENST00000609774 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
LMBR1-221ENST00000609774 SP8Q8IXZ3 490 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 ZNF34Q8IZ26 560 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 RPGRQ92834 1020 aaKnown RBP8.95□□□□□ -0.98
LMBR1-221ENST00000609774 CHMP4CQ96CF2 233 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 CSRNP1Q96S65 589 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 CFHR5Q9BXR6 569 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 PALD1Q9ULE6 856 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 CYP46A1Q9Y6A2 500 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 ELP1O95163 1332 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 MAP3K15Q6ZN16 1313 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 ZNF609O15014 1411 aa8.95□□□□□ -0.98
LMBR1-221ENST00000609774 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 NEMFO60524 1076 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 GADD45BO75293 160 aaPredicted RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 SURF6O75683 361 aaKnown RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 NTSR2O95665 410 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 SLC10A3P09131 477 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 HOXB7P09629 217 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 HCLS1P14317 486 aaPredicted RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 SYT1P21579 422 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 DSG2Q14126 1118 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 MAP3K11Q16584 847 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 AOC3Q16853 763 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 KIAA1524Q8TCG1 905 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 FAM200AQ8TCP9 573 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 TRPM4Q8TD43 1214 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 NECTIN2Q92692 538 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 UPF3BQ9BZI7 483 aaKnown RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 SCAND2PQ9GZW5 306 aaPredicted RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 GBA2Q9HCG7 927 aaPredicted RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 DDX19AQ9NUU7 478 aaKnown RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 CNOT7Q9UIV1 285 aaKnown RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 CNPY2Q9Y2B0 182 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 PAXBP1Q9Y5B6 917 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 LRRFIP2Q9Y608 721 aaKnown RBP8.94□□□□□ -0.98
LMBR1-221ENST00000609774 UBN2Q6ZU65 1347 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 DUOX1Q9NRD9 1551 aa8.94□□□□□ -0.98
LMBR1-221ENST00000609774 F6X3S4 739 aa8.93□□□□□ -0.98
LMBR1-221ENST00000609774 RPS12P25398 132 aaKnown RBP8.93□□□□□ -0.98
LMBR1-221ENST00000609774 PIP4K2AP48426 406 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms