RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 USP2O75604 605 aaPredicted RBP18.57■□□□□ 0.56
LMBR1-220ENST00000609081 TM4SF4P48230 202 aa18.57■□□□□ 0.56
LMBR1-220ENST00000609081 CCDC158Q5M9N0 1113 aa18.57■□□□□ 0.56
LMBR1-220ENST00000609081 SPATA5Q8NB90 893 aa18.57■□□□□ 0.56
LMBR1-220ENST00000609081 FAM163AQ96GL9 167 aaPredicted RBP18.57■□□□□ 0.56
LMBR1-220ENST00000609081 ZNF512BQ96KM6 892 aaPredicted RBP18.57■□□□□ 0.56
LMBR1-220ENST00000609081 TMEM39BQ9GZU3 492 aa18.57■□□□□ 0.56
LMBR1-220ENST00000609081 ABCF2Q9UG63 623 aa18.57■□□□□ 0.56
LMBR1-220ENST00000609081 GAKO14976 1311 aa18.56■□□□□ 0.56
LMBR1-220ENST00000609081 DIXDC1Q155Q3 683 aa18.56■□□□□ 0.56
LMBR1-220ENST00000609081 SPRYD7Q5W111 196 aa18.56■□□□□ 0.56
LMBR1-220ENST00000609081 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
LMBR1-220ENST00000609081 RNF186Q9NXI6 227 aa18.56■□□□□ 0.56
LMBR1-220ENST00000609081 HMG20BQ9P0W2 317 aa18.56■□□□□ 0.56
LMBR1-220ENST00000609081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.56■□□□□ 0.56
LMBR1-220ENST00000609081 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
LMBR1-220ENST00000609081 MAP4K4O95819 1239 aaPredicted RBP18.55■□□□□ 0.56
LMBR1-220ENST00000609081 GSTO1P78417 241 aa18.55■□□□□ 0.56
LMBR1-220ENST00000609081 DCAF15Q66K64 600 aa18.55■□□□□ 0.56
LMBR1-220ENST00000609081 CDC42EP5Q6NZY7 148 aa18.55■□□□□ 0.56
LMBR1-220ENST00000609081 FAM151AQ8WW52 585 aa18.55■□□□□ 0.56
LMBR1-220ENST00000609081 ZBTB40Q9NUA8 1239 aa18.55■□□□□ 0.56
LMBR1-220ENST00000609081 TRPA1O75762 1119 aa18.54■□□□□ 0.56
LMBR1-220ENST00000609081 ALDH1A1P00352 501 aa18.54■□□□□ 0.56
LMBR1-220ENST00000609081 LDHCP07864 332 aa18.54■□□□□ 0.56
LMBR1-220ENST00000609081 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
LMBR1-220ENST00000609081 OTOFQ9HC10 1997 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 AK9Q5TCS8 1911 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 CACNB3P54284 484 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 MAP3K9P80192 1104 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 WNK4Q96J92 1243 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 USP40Q9NVE5 1235 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 TSKSQ9UJT2 592 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 CSADQ9Y600 493 aa18.53■□□□□ 0.56
LMBR1-220ENST00000609081 ENTPD3O75355 529 aa18.52■□□□□ 0.56
LMBR1-220ENST00000609081 MCAMP43121 646 aa18.52■□□□□ 0.56
LMBR1-220ENST00000609081 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
LMBR1-220ENST00000609081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.52■□□□□ 0.56
LMBR1-220ENST00000609081 CLMNQ96JQ2 1002 aa18.52■□□□□ 0.56
LMBR1-220ENST00000609081 DBNDD2Q9BQY9 259 aa18.52■□□□□ 0.56
LMBR1-220ENST00000609081 CFHR5Q9BXR6 569 aa18.52■□□□□ 0.56
LMBR1-220ENST00000609081 FZD1Q9UP38 647 aa18.52■□□□□ 0.56
LMBR1-220ENST00000609081 MROH7-TTC4A0A0A0MT08 1334 aa18.51■□□□□ 0.55
LMBR1-220ENST00000609081 MECOMQ03112 1051 aa18.51■□□□□ 0.55
LMBR1-220ENST00000609081 GPR75-ASB3A0A0A6YYF3 556 aa18.5■□□□□ 0.55
LMBR1-220ENST00000609081 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
LMBR1-220ENST00000609081 OTUD7BQ6GQQ9 843 aa18.5■□□□□ 0.55
LMBR1-220ENST00000609081 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
LMBR1-220ENST00000609081 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.5■□□□□ 0.55
LMBR1-220ENST00000609081 CDAN1Q8IWY9 1227 aa18.5■□□□□ 0.55
LMBR1-220ENST00000609081 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
LMBR1-220ENST00000609081 ZNF341Q9BYN7 854 aa18.5■□□□□ 0.55
LMBR1-220ENST00000609081 LRP2BPQ9P2M1 347 aa18.5■□□□□ 0.55
LMBR1-220ENST00000609081 DBNLQ9UJU6 430 aaKnown RBP18.5■□□□□ 0.55
LMBR1-220ENST00000609081 MKRN3Q13064 507 aaKnown RBP18.49■□□□□ 0.55
LMBR1-220ENST00000609081 KIF1BPQ96EK5 621 aa18.49■□□□□ 0.55
LMBR1-220ENST00000609081 RAI14Q9P0K7 980 aa18.49■□□□□ 0.55
LMBR1-220ENST00000609081 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
LMBR1-220ENST00000609081 MAST2Q6P0Q8 1798 aa18.49■□□□□ 0.55
LMBR1-220ENST00000609081 RFX7Q2KHR2 1363 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 BTDP43251 543 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 TCP10Q12799 353 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 NFIAQ12857 509 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 VGLL4Q14135 290 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 EAF2Q96CJ1 260 aaPredicted RBP18.48■□□□□ 0.55
LMBR1-220ENST00000609081 OPTNQ96CV9 577 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 WRNIP1Q96S55 665 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 FAM198AQ9UFP1 575 aa18.48■□□□□ 0.55
LMBR1-220ENST00000609081 DOCK2Q92608 1830 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 RGS3P49796 1198 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
LMBR1-220ENST00000609081 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
LMBR1-220ENST00000609081 ELP3Q9H9T3 547 aa18.47■□□□□ 0.55
LMBR1-220ENST00000609081 TESPA1A2RU30 521 aaPredicted RBP18.46■□□□□ 0.55
LMBR1-220ENST00000609081 SPDYE5A6NIY4 337 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 BAG3O95817 575 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 PLCG2P16885 1265 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 GTF2A2P52657 109 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 AACSQ86V21 672 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 ZNF384Q8TF68 577 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 CCDC8Q9H0W5 538 aaPredicted RBP18.46■□□□□ 0.55
LMBR1-220ENST00000609081 ZNF112Q9UJU3 913 aa18.46■□□□□ 0.55
LMBR1-220ENST00000609081 COL2A1P02458 1487 aaPredicted RBP18.46■□□□□ 0.54
LMBR1-220ENST00000609081 WDHD1O75717 1129 aaPredicted RBP18.45■□□□□ 0.54
LMBR1-220ENST00000609081 RHBDL3P58872 404 aa18.45■□□□□ 0.54
LMBR1-220ENST00000609081 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
LMBR1-220ENST00000609081 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
LMBR1-220ENST00000609081 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
LMBR1-220ENST00000609081 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
LMBR1-220ENST00000609081 ATRNL1Q5VV63 1379 aa18.44■□□□□ 0.54
LMBR1-220ENST00000609081 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms