RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 PRAMEF18Q5VWM3 479 aa12.32□□□□□ -0.44
CTSA-215ENST00000607187 ZBTB40Q9NUA8 1239 aa12.32□□□□□ -0.44
CTSA-215ENST00000607187 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
CTSA-215ENST00000607187 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
CTSA-215ENST00000607187 CLRN2A0PK11 232 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
CTSA-215ENST00000607187 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.31□□□□□ -0.44
CTSA-215ENST00000607187 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 ZMYND15Q9H091 742 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 DEFB129Q9H1M3 183 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 MAST3O60307 1309 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
CTSA-215ENST00000607187 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 AKAP11Q9UKA4 1901 aa12.31□□□□□ -0.44
CTSA-215ENST00000607187 MAP2K2P36507 400 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
CTSA-215ENST00000607187 GRM1Q13255 1194 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 RASGRF1Q13972 1273 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 RGMBQ6NW40 437 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 ZDHHC15Q96MV8 337 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 NEUROD6Q96NK8 337 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
CTSA-215ENST00000607187 TDRD3Q9H7E2 651 aaKnown RBP12.3□□□□□ -0.44
CTSA-215ENST00000607187 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 GPR108Q9NPR9 543 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
CTSA-215ENST00000607187 PPP2R3BQ9Y5P8 575 aa12.3□□□□□ -0.44
CTSA-215ENST00000607187 FAM155AB1AL88 458 aaPredicted RBP12.29□□□□□ -0.44
CTSA-215ENST00000607187 AOC2O75106 756 aa12.29□□□□□ -0.44
CTSA-215ENST00000607187 PRDX5P30044 214 aa12.29□□□□□ -0.44
CTSA-215ENST00000607187 NF2P35240 595 aa12.29□□□□□ -0.44
CTSA-215ENST00000607187 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
CTSA-215ENST00000607187 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
CTSA-215ENST00000607187 HHIPL2Q6UWX4 724 aa12.29□□□□□ -0.44
CTSA-215ENST00000607187 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
CTSA-215ENST00000607187 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
CTSA-215ENST00000607187 MYO5AQ9Y4I1 1855 aaKnown RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 LDHBP07195 334 aaKnown RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 ARID4AP29374 1257 aaPredicted RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 ZNF157P51786 506 aaPredicted RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 MAP2K1Q02750 393 aaPredicted RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 NOGQ13253 232 aa12.28□□□□□ -0.44
CTSA-215ENST00000607187 TNFAIP1Q13829 316 aa12.28□□□□□ -0.44
CTSA-215ENST00000607187 RASA3Q14644 834 aa12.28□□□□□ -0.44
CTSA-215ENST00000607187 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
CTSA-215ENST00000607187 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
CTSA-215ENST00000607187 CCDC102AQ96A19 550 aa12.28□□□□□ -0.44
CTSA-215ENST00000607187 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
CTSA-215ENST00000607187 SSC5DA1L4H1 1573 aa12.27□□□□□ -0.44
CTSA-215ENST00000607187 UBE2Q2LH0YL09 131 aa12.27□□□□□ -0.45
CTSA-215ENST00000607187 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
CTSA-215ENST00000607187 GORABQ5T7V8 394 aa12.27□□□□□ -0.45
CTSA-215ENST00000607187 SIRT2Q8IXJ6 389 aa12.27□□□□□ -0.45
CTSA-215ENST00000607187 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
CTSA-215ENST00000607187 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 FOXN1O15353 648 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 HMMRO75330 724 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 SLC10A3P09131 477 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 UQCRFS1P1P0C7P4 283 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
CTSA-215ENST00000607187 DIXDC1Q155Q3 683 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 NBPF12Q5TAG4 269 aaPredicted RBP12.26□□□□□ -0.45
CTSA-215ENST00000607187 FKBP1CQ5VVH2 108 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 ARMC9Q7Z3E5 817 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 SPATA5Q8NB90 893 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 TEPSINQ96N21 525 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 DBNDD2Q9BQY9 259 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 HMG20BQ9P0W2 317 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 EXOC6BQ9Y2D4 811 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 DAGLAQ9Y4D2 1042 aa12.26□□□□□ -0.45
CTSA-215ENST00000607187 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 TRIM66O15016 1216 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 PPP1R12BO60237 982 aaPredicted RBP12.25□□□□□ -0.45
CTSA-215ENST00000607187 MCAMP43121 646 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 TNNI2P48788 182 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 LDLRAD1Q5T700 205 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 SPTY2D1Q68D10 685 aaPredicted RBP12.25□□□□□ -0.45
CTSA-215ENST00000607187 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 FAM83AQ86UY5 434 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
CTSA-215ENST00000607187 ZNF512BQ96KM6 892 aaPredicted RBP12.25□□□□□ -0.45
CTSA-215ENST00000607187 TMOD2Q9NZR1 351 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
CTSA-215ENST00000607187 ANGEL1Q9UNK9 670 aaKnown RBP12.25□□□□□ -0.45
CTSA-215ENST00000607187 GAKO14976 1311 aa12.25□□□□□ -0.45
CTSA-215ENST00000607187 LAMB1P07942 1786 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms