RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CDC42EP5Q6NZY7 148 aa22.34■■□□□ 1.17
CCDC12-208ENST00000603885 DZIP1Q86YF9 867 aaKnown RBP22.34■■□□□ 1.17
CCDC12-208ENST00000603885 ELP3Q9H9T3 547 aa22.34■■□□□ 1.17
CCDC12-208ENST00000603885 ALDH1A1P00352 501 aa22.33■■□□□ 1.17
CCDC12-208ENST00000603885 MS4A1P11836 297 aa22.33■■□□□ 1.17
CCDC12-208ENST00000603885 MAP3K9P80192 1104 aa22.33■■□□□ 1.17
CCDC12-208ENST00000603885 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.33■■□□□ 1.17
CCDC12-208ENST00000603885 CSADQ9Y600 493 aa22.33■■□□□ 1.17
CCDC12-208ENST00000603885 LAMB1P07942 1786 aa22.33■■□□□ 1.16
CCDC12-208ENST00000603885 SURF6O75683 361 aaKnown RBP22.32■■□□□ 1.16
CCDC12-208ENST00000603885 GJA5P36382 358 aa22.32■■□□□ 1.16
CCDC12-208ENST00000603885 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.32■■□□□ 1.16
CCDC12-208ENST00000603885 SLF2Q8IX21 1173 aa22.32■■□□□ 1.16
CCDC12-208ENST00000603885 PANK1Q8TE04 598 aa22.32■■□□□ 1.16
CCDC12-208ENST00000603885 FAM151AQ8WW52 585 aa22.32■■□□□ 1.16
CCDC12-208ENST00000603885 VGLL4Q14135 290 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 DCAF15Q66K64 600 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 IFNL1Q8IU54 200 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 OPTNQ96CV9 577 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 CFHR5Q9BXR6 569 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 GPR108Q9NPR9 543 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 USP40Q9NVE5 1235 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 HMG20BQ9P0W2 317 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 MYH2Q9UKX2 1941 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 GAKO14976 1311 aa22.31■■□□□ 1.16
CCDC12-208ENST00000603885 ARID4AP29374 1257 aaPredicted RBP22.3■■□□□ 1.16
CCDC12-208ENST00000603885 TCP10Q12799 353 aa22.3■■□□□ 1.16
CCDC12-208ENST00000603885 NOM1Q5C9Z4 860 aaKnown RBP22.3■■□□□ 1.16
CCDC12-208ENST00000603885 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
CCDC12-208ENST00000603885 SPATA5Q8NB90 893 aa22.3■■□□□ 1.16
CCDC12-208ENST00000603885 CCDC85CA6NKD9 419 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 GPR25O00155 361 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 UQCRFS1P1P0C7P4 283 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 NFIAQ12857 509 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 TNNI3KQ59H18 835 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 OTUD7BQ6GQQ9 843 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 CTU1Q7Z7A3 348 aaKnown RBP22.29■■□□□ 1.16
CCDC12-208ENST00000603885 ZNF296Q8WUU4 475 aaPredicted RBP22.29■■□□□ 1.16
CCDC12-208ENST00000603885 WRNIP1Q96S55 665 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 NOP58Q9Y2X3 529 aaKnown RBP22.29■■□□□ 1.16
CCDC12-208ENST00000603885 FPGT-TNNI3KV9GXZ4 949 aa22.29■■□□□ 1.16
CCDC12-208ENST00000603885 IGF2BP3O00425 579 aaKnown RBP eCLIP22.28■■□□□ 1.16
CCDC12-208ENST00000603885 PI16Q6UXB8 463 aa22.28■■□□□ 1.16
CCDC12-208ENST00000603885 FAM163AQ96GL9 167 aaPredicted RBP22.28■■□□□ 1.16
CCDC12-208ENST00000603885 ZNF341Q9BYN7 854 aa22.28■■□□□ 1.16
CCDC12-208ENST00000603885 FAM198AQ9UFP1 575 aa22.28■■□□□ 1.16
CCDC12-208ENST00000603885 MECOMQ03112 1051 aa22.27■■□□□ 1.16
CCDC12-208ENST00000603885 CEP85Q6P2H3 762 aa22.27■■□□□ 1.16
CCDC12-208ENST00000603885 MROH7-TTC4A0A0A0MT08 1334 aa22.27■■□□□ 1.16
CCDC12-208ENST00000603885 AK9Q5TCS8 1911 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 TESPA1A2RU30 521 aaPredicted RBP22.26■■□□□ 1.15
CCDC12-208ENST00000603885 MCAMP43121 646 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 TTC39AQ5SRH9 613 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 MIGA2Q7L4E1 593 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 OTUD5Q96G74 571 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 IDI2Q9BXS1 227 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 SNCAIPQ9Y6H5 919 aa22.26■■□□□ 1.15
CCDC12-208ENST00000603885 SPDYE5A6NIY4 337 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 FKTNO75072 461 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 ENTPD3O75355 529 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 BTDP43251 543 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 RGS3P49796 1198 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 GTF2A2P52657 109 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 GSTO1P78417 241 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 TBC1D9Q6ZT07 1266 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 ZKSCAN4Q969J2 545 aaPredicted RBP22.25■■□□□ 1.15
CCDC12-208ENST00000603885 MS4A4AQ96JQ5 239 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 DBNDD2Q9BQY9 259 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 R3HDMLQ9H3Y0 253 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 RAI14Q9P0K7 980 aa22.25■■□□□ 1.15
CCDC12-208ENST00000603885 LDHCP07864 332 aa22.24■■□□□ 1.15
CCDC12-208ENST00000603885 ERO1BQ86YB8 467 aa22.24■■□□□ 1.15
CCDC12-208ENST00000603885 RFX7Q2KHR2 1363 aa22.24■■□□□ 1.15
CCDC12-208ENST00000603885 GPR75-ASB3A0A0A6YYF3 556 aa22.23■■□□□ 1.15
CCDC12-208ENST00000603885 CCL15-CCL14A0A0B4J2E2 113 aa22.23■■□□□ 1.15
CCDC12-208ENST00000603885 CCL15Q16663 113 aa22.23■■□□□ 1.15
CCDC12-208ENST00000603885 NSUN4Q96CB9 384 aaKnown RBP22.23■■□□□ 1.15
CCDC12-208ENST00000603885 PTPN18Q99952 460 aa22.23■■□□□ 1.15
CCDC12-208ENST00000603885 LRP2BPQ9P2M1 347 aa22.23■■□□□ 1.15
CCDC12-208ENST00000603885 DDX19BQ9UMR2 479 aa22.23■■□□□ 1.15
CCDC12-208ENST00000603885 PKN2Q16513 984 aaKnown RBP22.22■■□□□ 1.15
CCDC12-208ENST00000603885 ERC1Q8IUD2 1116 aa22.22■■□□□ 1.15
CCDC12-208ENST00000603885 ZFPM1Q8IX07 1006 aa22.22■■□□□ 1.15
CCDC12-208ENST00000603885 ZNF384Q8TF68 577 aa22.22■■□□□ 1.15
CCDC12-208ENST00000603885 BRI3BPQ8WY22 251 aa22.22■■□□□ 1.15
CCDC12-208ENST00000603885 ZNF112Q9UJU3 913 aa22.22■■□□□ 1.15
CCDC12-208ENST00000603885 COG6Q9Y2V7 657 aa22.22■■□□□ 1.15
CCDC12-208ENST00000603885 WDHD1O75717 1129 aaPredicted RBP22.21■■□□□ 1.15
CCDC12-208ENST00000603885 INPP5BP32019 993 aa22.21■■□□□ 1.15
CCDC12-208ENST00000603885 PPIL2Q13356 520 aa22.21■■□□□ 1.15
CCDC12-208ENST00000603885 ZSCAN29Q8IWY8 852 aaPredicted RBP22.21■■□□□ 1.15
CCDC12-208ENST00000603885 ZNF512BQ96KM6 892 aaPredicted RBP22.21■■□□□ 1.15
CCDC12-208ENST00000603885 SNRKQ9NRH2 765 aa22.21■■□□□ 1.15
CCDC12-208ENST00000603885 DBNLQ9UJU6 430 aaKnown RBP22.21■■□□□ 1.15
CCDC12-208ENST00000603885 DOCK2Q92608 1830 aa22.2■■□□□ 1.14
CCDC12-208ENST00000603885 MAP4K4O95819 1239 aaPredicted RBP22.2■■□□□ 1.14
CCDC12-208ENST00000603885 CETPP11597 493 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms