RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 IFNL1Q8IU54 200 aa20.22■□□□□ 0.83
TUBE1-206ENST00000603722 CSADQ9Y600 493 aa20.22■□□□□ 0.83
TUBE1-206ENST00000603722 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
TUBE1-206ENST00000603722 IGF2BP3O00425 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
TUBE1-206ENST00000603722 ZBTB7BO15156 539 aaPredicted RBP20.21■□□□□ 0.83
TUBE1-206ENST00000603722 TCP10Q12799 353 aa20.21■□□□□ 0.83
TUBE1-206ENST00000603722 NFIAQ12857 509 aa20.21■□□□□ 0.83
TUBE1-206ENST00000603722 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
TUBE1-206ENST00000603722 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
TUBE1-206ENST00000603722 USP40Q9NVE5 1235 aa20.21■□□□□ 0.83
TUBE1-206ENST00000603722 GPR25O00155 361 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 ALDH1A1P00352 501 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 ATP8B2P98198 1209 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 CTU1Q7Z7A3 348 aaKnown RBP20.2■□□□□ 0.82
TUBE1-206ENST00000603722 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 SSH3Q8TE77 659 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 FAM151AQ8WW52 585 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 HOOK2Q96ED9 719 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 R3HDMLQ9H3Y0 253 aa20.2■□□□□ 0.82
TUBE1-206ENST00000603722 DCAF15Q66K64 600 aa20.19■□□□□ 0.82
TUBE1-206ENST00000603722 PI16Q6UXB8 463 aa20.19■□□□□ 0.82
TUBE1-206ENST00000603722 OTUD5Q96G74 571 aa20.19■□□□□ 0.82
TUBE1-206ENST00000603722 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
TUBE1-206ENST00000603722 GAKO14976 1311 aa20.19■□□□□ 0.82
TUBE1-206ENST00000603722 SURF6O75683 361 aaKnown RBP20.18■□□□□ 0.82
TUBE1-206ENST00000603722 NOM1Q5C9Z4 860 aaKnown RBP20.18■□□□□ 0.82
TUBE1-206ENST00000603722 SPTY2D1Q68D10 685 aaPredicted RBP20.18■□□□□ 0.82
TUBE1-206ENST00000603722 MIGA2Q7L4E1 593 aa20.18■□□□□ 0.82
TUBE1-206ENST00000603722 SPATA5Q8NB90 893 aa20.18■□□□□ 0.82
TUBE1-206ENST00000603722 FAM198AQ9UFP1 575 aa20.18■□□□□ 0.82
TUBE1-206ENST00000603722 ARID4AP29374 1257 aaPredicted RBP20.17■□□□□ 0.82
TUBE1-206ENST00000603722 TNNI3KQ59H18 835 aa20.17■□□□□ 0.82
TUBE1-206ENST00000603722 ERICH6Q7L0X2 663 aa20.17■□□□□ 0.82
TUBE1-206ENST00000603722 SLF2Q8IX21 1173 aa20.17■□□□□ 0.82
TUBE1-206ENST00000603722 ZKSCAN4Q969J2 545 aaPredicted RBP20.17■□□□□ 0.82
TUBE1-206ENST00000603722 ZNF341Q9BYN7 854 aa20.17■□□□□ 0.82
TUBE1-206ENST00000603722 SNCAIPQ9Y6H5 919 aa20.17■□□□□ 0.82
TUBE1-206ENST00000603722 FPGT-TNNI3KV9GXZ4 949 aa20.17■□□□□ 0.82
TUBE1-206ENST00000603722 CASP8AP2Q9UKL3 1982 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
TUBE1-206ENST00000603722 SPDYE5A6NIY4 337 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 BTDP43251 543 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 MECOMQ03112 1051 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 PTPN18Q99952 460 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 GPR108Q9NPR9 543 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 MROH7-TTC4A0A0A0MT08 1334 aa20.16■□□□□ 0.82
TUBE1-206ENST00000603722 OTOFQ9HC10 1997 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 FKTNO75072 461 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 UQCRFS1P1P0C7P4 283 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 MCAMP43121 646 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 CEP85Q6P2H3 762 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 TBC1D9Q6ZT07 1266 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 ZFPM1Q8IX07 1006 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 BRI3BPQ8WY22 251 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 MS4A4AQ96JQ5 239 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 DBNDD2Q9BQY9 259 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 RFX7Q2KHR2 1363 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 MYH13Q9UKX3 1938 aa20.15■□□□□ 0.82
TUBE1-206ENST00000603722 AKAP11Q9UKA4 1901 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 CCL15-CCL14A0A0B4J2E2 113 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 RGS3P49796 1198 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 GTF2A2P52657 109 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 CRHR2Q13324 411 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 CCL15Q16663 113 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 TTC39AQ5SRH9 613 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 ZNF384Q8TF68 577 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 FAM163AQ96GL9 167 aaPredicted RBP20.14■□□□□ 0.81
TUBE1-206ENST00000603722 IDI2Q9BXS1 227 aa20.14■□□□□ 0.81
TUBE1-206ENST00000603722 NOP58Q9Y2X3 529 aaKnown RBP20.14■□□□□ 0.81
TUBE1-206ENST00000603722 INPP5BP32019 993 aa20.13■□□□□ 0.81
TUBE1-206ENST00000603722 PICALMQ13492 652 aa20.13■□□□□ 0.81
TUBE1-206ENST00000603722 RAI14Q9P0K7 980 aa20.13■□□□□ 0.81
TUBE1-206ENST00000603722 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
TUBE1-206ENST00000603722 MS4A1P11836 297 aa20.12■□□□□ 0.81
TUBE1-206ENST00000603722 GSTO1P78417 241 aa20.12■□□□□ 0.81
TUBE1-206ENST00000603722 CCDC158Q5M9N0 1113 aa20.12■□□□□ 0.81
TUBE1-206ENST00000603722 ZSCAN29Q8IWY8 852 aaPredicted RBP20.12■□□□□ 0.81
TUBE1-206ENST00000603722 NSUN4Q96CB9 384 aaKnown RBP20.12■□□□□ 0.81
TUBE1-206ENST00000603722 SNRKQ9NRH2 765 aa20.12■□□□□ 0.81
TUBE1-206ENST00000603722 ATRNL1Q5VV63 1379 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 GPR75-ASB3A0A0A6YYF3 556 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 IRF6O14896 467 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 ENTPD3O75355 529 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 PPIL2Q13356 520 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 PKN2Q16513 984 aaKnown RBP20.11■□□□□ 0.81
TUBE1-206ENST00000603722 DDX4Q9NQI0 724 aaKnown RBP20.11■□□□□ 0.81
TUBE1-206ENST00000603722 TLR7Q9NYK1 1049 aaKnown RBP20.11■□□□□ 0.81
TUBE1-206ENST00000603722 LRP2BPQ9P2M1 347 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 ZNF112Q9UJU3 913 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 HPS5Q9UPZ3 1129 aa20.11■□□□□ 0.81
TUBE1-206ENST00000603722 RHBDL3P58872 404 aa20.1■□□□□ 0.81
TUBE1-206ENST00000603722 SH3BP5LQ7L8J4 393 aa20.1■□□□□ 0.81
TUBE1-206ENST00000603722 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
TUBE1-206ENST00000603722 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
TUBE1-206ENST00000603722 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
TUBE1-206ENST00000603722 EXOC6BQ9Y2D4 811 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms