RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
SSBP4-213ENST00000602088 THSD7BQ9C0I4 1608 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 FAM155AB1AL88 458 aaPredicted RBP20.47■□□□□ 0.87
SSBP4-213ENST00000602088 ZAP70P43403 619 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 PRKG1Q13976 671 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 ARMC9Q7Z3E5 817 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
SSBP4-213ENST00000602088 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
SSBP4-213ENST00000602088 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
SSBP4-213ENST00000602088 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
SSBP4-213ENST00000602088 NOGQ13253 232 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 LDLRAD1Q5T700 205 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 CDAN1Q8IWY9 1227 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 LRRCC1Q9C099 1032 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 ANGEL1Q9UNK9 670 aaKnown RBP20.46■□□□□ 0.87
SSBP4-213ENST00000602088 MROH7-TTC4A0A0A0MT08 1334 aa20.46■□□□□ 0.87
SSBP4-213ENST00000602088 LDHCP07864 332 aa20.45■□□□□ 0.86
SSBP4-213ENST00000602088 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
SSBP4-213ENST00000602088 GSTO1P78417 241 aa20.45■□□□□ 0.86
SSBP4-213ENST00000602088 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-213ENST00000602088 GPR75-ASB3A0A0A6YYF3 556 aa20.44■□□□□ 0.86
SSBP4-213ENST00000602088 IGSF3O75054 1194 aa20.44■□□□□ 0.86
SSBP4-213ENST00000602088 USP2O75604 605 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-213ENST00000602088 SLC10A3P09131 477 aa20.44■□□□□ 0.86
SSBP4-213ENST00000602088 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
SSBP4-213ENST00000602088 BCL11AQ9H165 835 aa20.44■□□□□ 0.86
SSBP4-213ENST00000602088 BTDP43251 543 aa20.43■□□□□ 0.86
SSBP4-213ENST00000602088 NFIAQ12857 509 aa20.43■□□□□ 0.86
SSBP4-213ENST00000602088 RASAL3Q86YV0 1011 aa20.43■□□□□ 0.86
SSBP4-213ENST00000602088 FAM151AQ8WW52 585 aa20.43■□□□□ 0.86
SSBP4-213ENST00000602088 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
SSBP4-213ENST00000602088 FAM198AQ9UFP1 575 aa20.43■□□□□ 0.86
SSBP4-213ENST00000602088 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
SSBP4-213ENST00000602088 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
SSBP4-213ENST00000602088 MYO5AQ9Y4I1 1855 aaKnown RBP20.42■□□□□ 0.86
SSBP4-213ENST00000602088 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-213ENST00000602088 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.42■□□□□ 0.86
SSBP4-213ENST00000602088 IDI2Q9BXS1 227 aa20.42■□□□□ 0.86
SSBP4-213ENST00000602088 RPAP1Q9BWH6 1393 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-213ENST00000602088 UNCXA6NJT0 531 aa20.41■□□□□ 0.86
SSBP4-213ENST00000602088 IREB2P48200 963 aaKnown RBP20.41■□□□□ 0.86
SSBP4-213ENST00000602088 RHBDL3P58872 404 aa20.41■□□□□ 0.86
SSBP4-213ENST00000602088 TCP10Q12799 353 aa20.41■□□□□ 0.86
SSBP4-213ENST00000602088 AAMPQ13685 434 aa20.41■□□□□ 0.86
SSBP4-213ENST00000602088 NAA16Q6N069 864 aaPredicted RBP20.41■□□□□ 0.86
SSBP4-213ENST00000602088 KIF23Q02241 960 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-213ENST00000602088 ANTXR1Q9H6X2 564 aa20.4■□□□□ 0.86
SSBP4-213ENST00000602088 RFX7Q2KHR2 1363 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 FOXN1O15353 648 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 ENTPD3O75355 529 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-213ENST00000602088 MAP4K4O95819 1239 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-213ENST00000602088 ATP5JP18859 108 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 RGS3P49796 1198 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 ZFPM1Q8IX07 1006 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 AIDAQ96BJ3 306 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 HOOK2Q96ED9 719 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 SLC10A4Q96EP9 437 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.85
SSBP4-213ENST00000602088 IDH1O75874 414 aaKnown RBP20.38■□□□□ 0.85
SSBP4-213ENST00000602088 ANKRD13AQ8IZ07 590 aa20.38■□□□□ 0.85
SSBP4-213ENST00000602088 DDX4Q9NQI0 724 aaKnown RBP20.38■□□□□ 0.85
SSBP4-213ENST00000602088 PPP4CP60510 307 aa20.37■□□□□ 0.85
SSBP4-213ENST00000602088 TTF1Q15361 905 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-213ENST00000602088 ADGRA1Q86SQ6 560 aa20.37■□□□□ 0.85
SSBP4-213ENST00000602088 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
SSBP4-213ENST00000602088 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
SSBP4-213ENST00000602088 NOL10Q9BSC4 688 aaKnown RBP20.37■□□□□ 0.85
SSBP4-213ENST00000602088 BEGAINQ9BUH8 593 aa20.37■□□□□ 0.85
SSBP4-213ENST00000602088 NPM3O75607 178 aaKnown RBP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 BAG3O95817 575 aa20.36■□□□□ 0.85
SSBP4-213ENST00000602088 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
SSBP4-213ENST00000602088 HDAC1Q13547 482 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 SPRYD7Q5W111 196 aa20.36■□□□□ 0.85
SSBP4-213ENST00000602088 TMED8Q6PL24 325 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 DNAJC2Q99543 621 aaKnown RBP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSBP4-213ENST00000602088 DOCK2Q92608 1830 aa20.36■□□□□ 0.85
SSBP4-213ENST00000602088 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 GOLIM4O00461 696 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 CYP7A1P22680 504 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 PICALMQ13492 652 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 SH3BP5LQ7L8J4 393 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-213ENST00000602088 SH3RF3Q8TEJ3 882 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-213ENST00000602088 BOLA2Q9H3K6 86 aa20.35■□□□□ 0.85
SSBP4-213ENST00000602088 OTOFQ9HC10 1997 aa20.34■□□□□ 0.85
SSBP4-213ENST00000602088 PLCG2P16885 1265 aa20.34■□□□□ 0.85
SSBP4-213ENST00000602088 CTCFP49711 727 aaPredicted RBP20.34■□□□□ 0.85
SSBP4-213ENST00000602088 MIGA2Q7L4E1 593 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms