RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 PANK1Q8TE04 598 aa32.13■■■□□ 2.73
PNKP-216ENST00000601816 RPAP1Q9BWH6 1393 aaPredicted RBP32.13■■■□□ 2.73
PNKP-216ENST00000601816 ELP3Q9H9T3 547 aa32.13■■■□□ 2.73
PNKP-216ENST00000601816 MAP3K9P80192 1104 aa32.12■■■□□ 2.73
PNKP-216ENST00000601816 SPTY2D1Q68D10 685 aaPredicted RBP32.12■■■□□ 2.73
PNKP-216ENST00000601816 SURF6O75683 361 aaKnown RBP32.11■■■□□ 2.73
PNKP-216ENST00000601816 GJA5P36382 358 aa32.11■■■□□ 2.73
PNKP-216ENST00000601816 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.11■■■□□ 2.73
PNKP-216ENST00000601816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.11■■■□□ 2.733e-6■■■■■ 38.3
PNKP-216ENST00000601816 CSADQ9Y600 493 aa32.11■■■□□ 2.73
PNKP-216ENST00000601816 ALDH1A1P00352 501 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 MS4A1P11836 297 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 VGLL4Q14135 290 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 SLF2Q8IX21 1173 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 FAM151AQ8WW52 585 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 OPTNQ96CV9 577 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 USP40Q9NVE5 1235 aa32.1■■■□□ 2.73
PNKP-216ENST00000601816 IFNL1Q8IU54 200 aa32.09■■■□□ 2.73
PNKP-216ENST00000601816 GPR108Q9NPR9 543 aa32.09■■■□□ 2.73
PNKP-216ENST00000601816 HMG20BQ9P0W2 317 aa32.09■■■□□ 2.73
PNKP-216ENST00000601816 GAKO14976 1311 aa32.08■■■□□ 2.73
PNKP-216ENST00000601816 ARID4AP29374 1257 aaPredicted RBP32.08■■■□□ 2.73
PNKP-216ENST00000601816 TCP10Q12799 353 aa32.08■■■□□ 2.73
PNKP-216ENST00000601816 DCAF15Q66K64 600 aa32.08■■■□□ 2.73
PNKP-216ENST00000601816 SPATA5Q8NB90 893 aa32.08■■■□□ 2.73
PNKP-216ENST00000601816 CFHR5Q9BXR6 569 aa32.08■■■□□ 2.73
PNKP-216ENST00000601816 LAMB1P07942 1786 aa32.07■■■□□ 2.72
PNKP-216ENST00000601816 UQCRFS1P1P0C7P4 283 aa32.07■■■□□ 2.72
PNKP-216ENST00000601816 NFIAQ12857 509 aa32.07■■■□□ 2.72
PNKP-216ENST00000601816 TNNI3KQ59H18 835 aa32.07■■■□□ 2.72
PNKP-216ENST00000601816 ERICH6Q7L0X2 663 aa32.07■■■□□ 2.72
PNKP-216ENST00000601816 FPGT-TNNI3KV9GXZ4 949 aa32.07■■■□□ 2.72
PNKP-216ENST00000601816 NOM1Q5C9Z4 860 aaKnown RBP32.06■■■□□ 2.72
PNKP-216ENST00000601816 ZNF296Q8WUU4 475 aaPredicted RBP32.06■■■□□ 2.72
PNKP-216ENST00000601816 WRNIP1Q96S55 665 aa32.06■■■□□ 2.72
PNKP-216ENST00000601816 NOP58Q9Y2X3 529 aaKnown RBP32.06■■■□□ 2.72
PNKP-216ENST00000601816 MYH2Q9UKX2 1941 aa32.05■■■□□ 2.72
PNKP-216ENST00000601816 CCDC85CA6NKD9 419 aa32.05■■■□□ 2.72
PNKP-216ENST00000601816 GPR25O00155 361 aa32.05■■■□□ 2.72
PNKP-216ENST00000601816 CEP85Q6P2H3 762 aa32.05■■■□□ 2.72
PNKP-216ENST00000601816 PI16Q6UXB8 463 aa32.05■■■□□ 2.72
PNKP-216ENST00000601816 CTU1Q7Z7A3 348 aaKnown RBP32.05■■■□□ 2.72
PNKP-216ENST00000601816 FAM163AQ96GL9 167 aaPredicted RBP32.05■■■□□ 2.72
PNKP-216ENST00000601816 FAM198AQ9UFP1 575 aa32.05■■■□□ 2.72
PNKP-216ENST00000601816 IGF2BP3O00425 579 aaKnown RBP eCLIP32.04■■■□□ 2.72
PNKP-216ENST00000601816 CNKSR2Q8WXI2 1034 aa32.04■■■□□ 2.72
PNKP-216ENST00000601816 ZNF341Q9BYN7 854 aa32.04■■■□□ 2.72
PNKP-216ENST00000601816 MECOMQ03112 1051 aa32.03■■■□□ 2.72
PNKP-216ENST00000601816 OTUD7BQ6GQQ9 843 aa32.03■■■□□ 2.72
PNKP-216ENST00000601816 MIGA2Q7L4E1 593 aa32.03■■■□□ 2.72
PNKP-216ENST00000601816 RCAN3Q9UKA8 241 aa32.03■■■□□ 2.72
PNKP-216ENST00000601816 MROH7-TTC4A0A0A0MT08 1334 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 TESPA1A2RU30 521 aaPredicted RBP32.02■■■□□ 2.72
PNKP-216ENST00000601816 MCAMP43121 646 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 CCDC158Q5M9N0 1113 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 TTC39AQ5SRH9 613 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 OTUD5Q96G74 571 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 DBNDD2Q9BQY9 259 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 R3HDMLQ9H3Y0 253 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 SNCAIPQ9Y6H5 919 aa32.02■■■□□ 2.72
PNKP-216ENST00000601816 SPDYE5A6NIY4 337 aa32.01■■■□□ 2.71
PNKP-216ENST00000601816 BTDP43251 543 aa32.01■■■□□ 2.71
PNKP-216ENST00000601816 TBC1D9Q6ZT07 1266 aa32.01■■■□□ 2.71
PNKP-216ENST00000601816 IDI2Q9BXS1 227 aa32.01■■■□□ 2.71
PNKP-216ENST00000601816 RGS3P49796 1198 aa32■■■□□ 2.71
PNKP-216ENST00000601816 GSTO1P78417 241 aa32■■■□□ 2.71
PNKP-216ENST00000601816 ZKSCAN4Q969J2 545 aaPredicted RBP32■■■□□ 2.71
PNKP-216ENST00000601816 RFX7Q2KHR2 1363 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 FKTNO75072 461 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 ENTPD3O75355 529 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 GTF2A2P52657 109 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 ERO1BQ86YB8 467 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 MS4A4AQ96JQ5 239 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 RAI14Q9P0K7 980 aa31.99■■■□□ 2.71
PNKP-216ENST00000601816 LDHCP07864 332 aa31.98■■■□□ 2.71
PNKP-216ENST00000601816 ZFPM1Q8IX07 1006 aa31.98■■■□□ 2.71
PNKP-216ENST00000601816 ZNF384Q8TF68 577 aa31.98■■■□□ 2.71
PNKP-216ENST00000601816 PTPN18Q99952 460 aa31.98■■■□□ 2.71
PNKP-216ENST00000601816 DDX19BQ9UMR2 479 aa31.98■■■□□ 2.71
PNKP-216ENST00000601816 GPR75-ASB3A0A0A6YYF3 556 aa31.97■■■□□ 2.71
PNKP-216ENST00000601816 NSUN4Q96CB9 384 aaKnown RBP31.97■■■□□ 2.71
PNKP-216ENST00000601816 SNRKQ9NRH2 765 aa31.97■■■□□ 2.71
PNKP-216ENST00000601816 LRP2BPQ9P2M1 347 aa31.97■■■□□ 2.71
PNKP-216ENST00000601816 COG6Q9Y2V7 657 aa31.97■■■□□ 2.71
PNKP-216ENST00000601816 CCL15-CCL14A0A0B4J2E2 113 aa31.96■■■□□ 2.71
PNKP-216ENST00000601816 INPP5BP32019 993 aa31.96■■■□□ 2.71
PNKP-216ENST00000601816 CCL15Q16663 113 aa31.96■■■□□ 2.71
PNKP-216ENST00000601816 BRI3BPQ8WY22 251 aa31.96■■■□□ 2.71
PNKP-216ENST00000601816 AK9Q5TCS8 1911 aa31.96■■■□□ 2.71
PNKP-216ENST00000601816 WDHD1O75717 1129 aaPredicted RBP31.95■■■□□ 2.71
PNKP-216ENST00000601816 ERC1Q8IUD2 1116 aa31.95■■■□□ 2.71
PNKP-216ENST00000601816 ZSCAN29Q8IWY8 852 aaPredicted RBP31.95■■■□□ 2.71
PNKP-216ENST00000601816 ZNF512BQ96KM6 892 aaPredicted RBP31.95■■■□□ 2.71
PNKP-216ENST00000601816 ZNF112Q9UJU3 913 aa31.95■■■□□ 2.71
PNKP-216ENST00000601816 DBNLQ9UJU6 430 aaKnown RBP31.95■■■□□ 2.71
PNKP-216ENST00000601816 EXOC6BQ9Y2D4 811 aa31.95■■■□□ 2.71
PNKP-216ENST00000601816 CRHR2Q13324 411 aa31.94■■■□□ 2.7
PNKP-216ENST00000601816 PPIL2Q13356 520 aa31.94■■■□□ 2.7
PNKP-216ENST00000601816 PICALMQ13492 652 aa31.94■■■□□ 2.7
PNKP-216ENST00000601816 PKN2Q16513 984 aaKnown RBP31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms