RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 NUDT8Q8WV74 236 aa7□□□□□ -1.29
VRK3-222ENST00000601324 TCF12Q99081 682 aa7□□□□□ -1.29
VRK3-222ENST00000601324 BCO2Q9BYV7 579 aa7□□□□□ -1.29
VRK3-222ENST00000601324 SRCIN1Q9C0H9 1055 aa7□□□□□ -1.29
VRK3-222ENST00000601324 BHLHE41Q9C0J9 482 aaPredicted RBP7□□□□□ -1.29
VRK3-222ENST00000601324 LIN7BQ9HAP6 207 aa7□□□□□ -1.29
VRK3-222ENST00000601324 ENAMQ9NRM1 1142 aa7□□□□□ -1.29
VRK3-222ENST00000601324 ADGBQ8N7X0 1667 aa7□□□□□ -1.29
VRK3-222ENST00000601324 ROBO1Q9Y6N7 1651 aa7□□□□□ -1.29
VRK3-222ENST00000601324 PLEKHH2Q8IVE3 1493 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 JCADQ9P266 1359 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 PDE2AO00408 941 aaPredicted RBP6.99□□□□□ -1.29
VRK3-222ENST00000601324 AMPD1P23109 780 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 CEP135Q66GS9 1140 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 NXPE3Q969Y0 559 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 ZNF428Q96B54 188 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 FAM161BQ96MY7 647 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 HHIPQ96QV1 700 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
VRK3-222ENST00000601324 OSBPL7Q9BZF2 842 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 C12orf49Q9H741 205 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 JPH1Q9HDC5 661 aaPredicted RBP6.99□□□□□ -1.29
VRK3-222ENST00000601324 AK5Q9Y6K8 562 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 SLIT1O75093 1534 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 CASKIN1Q8WXD9 1431 aa6.99□□□□□ -1.29
VRK3-222ENST00000601324 SCAF11Q99590 1463 aaKnown RBP6.98□□□□□ -1.29
VRK3-222ENST00000601324 TMEM94Q12767 1356 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 UNCXA6NJT0 531 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 M0R082 166 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 EIF4BP23588 611 aaKnown RBP6.98□□□□□ -1.29
VRK3-222ENST00000601324 RBM25P49756 843 aaKnown RBP6.98□□□□□ -1.29
VRK3-222ENST00000601324 NXPE4Q6UWF7 544 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 GLIS3Q8NEA6 775 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 ZNF417Q8TAU3 575 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 ZNF587Q96SQ5 575 aaPredicted RBP6.98□□□□□ -1.29
VRK3-222ENST00000601324 MRS2Q9HD23 443 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 PRDM6Q9NQX0 595 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 PPP4R2Q9NY27 417 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 CCDC18Q5T9S5 1454 aa6.98□□□□□ -1.29
VRK3-222ENST00000601324 COL16A1Q07092 1604 aaPredicted RBP6.98□□□□□ -1.29
VRK3-222ENST00000601324 SORBS3O60504 671 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 LILRB5O75023 590 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 ARHGEF15O94989 841 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 PTPRAP18433 802 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
VRK3-222ENST00000601324 GRIK5Q16478 980 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 CACTIN-AS1Q8N1I8 211 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 NEDD1Q8NHV4 660 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 FAM8A1Q9UBU6 413 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 ERVK-7P63135 1459 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
VRK3-222ENST00000601324 ZNF644Q9H582 1327 aaPredicted RBP6.97□□□□□ -1.29
VRK3-222ENST00000601324 FGD6Q6ZV73 1430 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 TMEM238LA0A1B0GVL6 79 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 KIF3BO15066 747 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 VAMP1P23763 118 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 DGKGP49619 791 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 AFF1P51825 1210 aaKnown RBP6.96□□□□□ -1.3
VRK3-222ENST00000601324 MRPL58Q14197 206 aaKnown RBP6.96□□□□□ -1.3
VRK3-222ENST00000601324 C8orf86Q6ZUL3 223 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 ZSCAN1Q8NBB4 408 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 MRRFQ96E11 262 aaKnown RBP6.96□□□□□ -1.3
VRK3-222ENST00000601324 ADAM19Q9H013 955 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 LRRC9Q6ZRR7 1453 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 TET3O43151 1660 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 SPATA31A6Q5VVP1 1343 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 UBR1Q8IWV7 1749 aa6.96□□□□□ -1.3
VRK3-222ENST00000601324 A0A096LPE4 126 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 METTL12A8MUP2 240 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 KCNA6P17658 529 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 ITPKAP23677 461 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 GSTT1P30711 240 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 GRIA4P48058 902 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 PTPN12Q05209 780 aaKnown RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 ZNF772Q68DY9 489 aaPredicted RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 GDF6Q6KF10 455 aaPredicted RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 ASAP3Q8TDY4 903 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 BSNDQ8WZ55 320 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 LACRTQ9GZZ8 138 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 RRAGCQ9HB90 399 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 KIAA1522Q9P206 1035 aaPredicted RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 ABCC3O15438 1527 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 PRDM15P57071 1507 aaPredicted RBP6.95□□□□□ -1.3
VRK3-222ENST00000601324 WASHC2CQ9Y4E1 1318 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 SETBP1Q9Y6X0 1596 aa6.95□□□□□ -1.3
VRK3-222ENST00000601324 RGS12O14924 1447 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 FAM177BA6PVY3 158 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 USP17L7P0C7H9 530 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 FCGRTP55899 365 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 INSM1Q01101 510 aaPredicted RBP6.94□□□□□ -1.3
VRK3-222ENST00000601324 SPRED3Q2MJR0 410 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 C3orf58Q8NDZ4 430 aa6.94□□□□□ -1.3
VRK3-222ENST00000601324 CRELD1Q96HD1 420 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms