RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-211	ENST00000601222	ZIC5	Q96T25	663 aa		11.23	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	TMEM39B	Q9GZU3	492 aa		11.23	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	DBNL	Q9UJU6	430 aa	Known RBP	11.23	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	ANGEL1	Q9UNK9	670 aa	Known RBP	11.23	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	GAK	O14976	1311 aa		11.23	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	CA12	O43570	354 aa		11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	RAB11FIP3	O75154	756 aa		11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	IREB2	P48200	963 aa	Known RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	CACNB3	P54284	484 aa		11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	RRP1	P56182	461 aa	Known RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	KIF23	Q02241	960 aa	Predicted RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	REM2	Q8IYK8	340 aa	Predicted RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	KIF1BP	Q96EK5	621 aa		11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	OTOF	Q9HC10	1997 aa		11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	TLR7	Q9NYK1	1049 aa	Known RBP	11.22	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	MROH7-TTC4	A0A0A0MT08	1334 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	USP2	O75604	605 aa	Predicted RBP	11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	MECOM	Q03112	1051 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	TBC1D9	Q6ZT07	1266 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	AACS	Q86V21	672 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	CDAN1	Q8IWY9	1227 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	CLASRP	Q8N2M8	674 aa	Known RBP	11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	ZNF384	Q8TF68	577 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	NSUN4	Q96CB9	384 aa	Known RBP	11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	IL1RAPL2	Q9NP60	686 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	PRDM10	Q9NQV6	1147 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	USP40	Q9NVE5	1235 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	FZD1	Q9UP38	647 aa		11.21	□□□□□ -0.61
SIPA1L3-211	ENST00000601222	CASP8AP2	Q9UKL3	1982 aa		11.21	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	LAMB1	P07942	1786 aa		11.21	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	GPR75-ASB3	A0A0A6YYF3	556 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	IGSF3	O75054	1194 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	HSPA8	P11142	646 aa	Known RBP	11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	GSTO1	P78417	241 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	NFIA	Q12857	509 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	FAM151A	Q8WW52	585 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	HOOK2	Q96ED9	719 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	SLC10A4	Q96EP9	437 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	CLMN	Q96JQ2	1002 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	CSRNP1	Q96S65	589 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	SNRK	Q9NRH2	765 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	RAI14	Q9P0K7	980 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	LRP2BP	Q9P2M1	347 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	MAST2	Q6P0Q8	1798 aa		11.2	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	APBB1	O00213	710 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	CYP2E1	P05181	493 aa	Predicted RBP	11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	LDHC	P07864	332 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	BTD	P43251	543 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	ZAP70	P43403	619 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	LBX1	P52954	281 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	SPRYD7	Q5W111	196 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	ANKRD13A	Q8IZ07	590 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	IDI2	Q9BXS1	227 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	FAM198A	Q9UFP1	575 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	DOCK2	Q92608	1830 aa		11.19	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	RFX7	Q2KHR2	1363 aa		11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	ENTPD3	O75355	529 aa		11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	MAP4K4	O95819	1239 aa	Predicted RBP	11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	ZBTB48	P10074	688 aa	Predicted RBP	11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	RHBDL3	P58872	404 aa		11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	TCP10	Q12799	353 aa		11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	DCAF15	Q66K64	600 aa		11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	SAGE1	Q9NXZ1	904 aa		11.18	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	CDK5RAP2	Q96SN8	1893 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	NPM3	O75607	178 aa	Known RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	WDHD1	O75717	1129 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	IFIT2	P09913	472 aa	Known RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	TM4SF4	P48230	202 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	RGS3	P49796	1198 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	MAP3K9	P80192	1104 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	MKRN3	Q13064	507 aa	Known RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	NAA16	Q6N069	864 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	WNK4	Q96J92	1243 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	LRRCC1	Q9C099	1032 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	PIH1D3	Q9NQM4	214 aa	Known RBP	11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	RNF186	Q9NXI6	227 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	TSKS	Q9UJT2	592 aa		11.17	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	FOCAD	Q5VW36	1801 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	TRPA1	O75762	1119 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	SREBF2	Q12772	1141 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	VGLL4	Q14135	290 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	TMED8	Q6PL24	325 aa	Predicted RBP	11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	ZFPM1	Q8IX07	1006 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	WRNIP1	Q96S55	665 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	ZNF341	Q9BYN7	854 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	DCTPP1	Q9H773	170 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	DDX4	Q9NQI0	724 aa	Known RBP	11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	PCDHB15	Q9Y5E8	787 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	CSAD	Q9Y600	493 aa		11.16	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	MANSC4	A6NHS7	340 aa	Predicted RBP	11.15	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	IDH1	O75874	414 aa	Known RBP	11.15	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	BAG3	O95817	575 aa		11.15	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	PLCG2	P16885	1265 aa		11.15	□□□□□ -0.62
SIPA1L3-211	ENST00000601222	GJA5	P36382	358 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms