RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 UBE2Q2LH0YL09 131 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 USP17L8P0C7I0 530 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 WDR66Q8TBY9 1149 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 TBC1D22AQ8WUA7 517 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 COL1A1P02452 1464 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-207ENST00000600804 USP17L3A6NCW0 530 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 USP17L4A6NCW7 530 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 TBC1D8O95759 1140 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 DACT2Q5SW24 774 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 USP17L1Q7RTZ2 530 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 ZNF296Q8WUU4 475 aaPredicted RBP14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 R3HDMLQ9H3Y0 253 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 DOCK2Q92608 1830 aa14.15□□□□□ -0.14
CHMP2A-207ENST00000600804 SSC5DA1L4H1 1573 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 MYH7P12883 1935 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 MMP14P50281 582 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 FKBP1BP68106 108 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 TTC22Q5TAA0 569 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 TTLL5Q6EMB2 1281 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 BOLA2Q9H3K6 86 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 KIAA0100Q14667 2235 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 MYO3BQ8WXR4 1341 aa14.14□□□□□ -0.15
CHMP2A-207ENST00000600804 AK9Q5TCS8 1911 aa14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 MYO5AQ9Y4I1 1855 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 WNT10BO00744 389 aa14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 CYP2E1P05181 493 aaPredicted RBP14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 PAG1Q9NWQ8 432 aa14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 FZD1Q9UP38 647 aa14.13□□□□□ -0.15
CHMP2A-207ENST00000600804 ZAP70P43403 619 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 TM4SF4P48230 202 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 GTF2IP78347 998 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 EVI5LQ96CN4 794 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 MRIQ9BWK5 157 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 PCDH10Q9P2E7 1040 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 IQSEC3Q9UPP2 1182 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 ZSWIM8A7E2V4 1837 aa14.12□□□□□ -0.15
CHMP2A-207ENST00000600804 GSPT1P15170 499 aaKnown RBP14.11□□□□□ -0.15
CHMP2A-207ENST00000600804 MFSD14BQ5SR56 506 aa14.11□□□□□ -0.15
CHMP2A-207ENST00000600804 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
CHMP2A-207ENST00000600804 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-207ENST00000600804 KBTBD3Q8NAB2 608 aa14.11□□□□□ -0.15
CHMP2A-207ENST00000600804 ZBED3Q96IU2 234 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-207ENST00000600804 MAST2Q6P0Q8 1798 aa14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 GPR25O00155 361 aa14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 RGS3P49796 1198 aa14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 DNAJC2Q99543 621 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
CHMP2A-207ENST00000600804 GOLIM4O00461 696 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 HDLBPQ00341 1268 aaKnown RBP14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 MAP3K12Q12852 859 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 PRKG1Q13976 671 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 SKAP1Q86WV1 359 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 CERS5Q8N5B7 392 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 ANTXR1Q9H6X2 564 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 PCDHAC2Q9Y5I4 1007 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 MAST3O60307 1309 aa14.09□□□□□ -0.15
CHMP2A-207ENST00000600804 SZT2Q5T011 3432 aa14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 MYH2Q9UKX2 1941 aa14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 LDHBP07195 334 aaKnown RBP14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 ZFYP08048 801 aaPredicted RBP14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 SDSP20132 328 aa14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 NOM1Q5C9Z4 860 aaKnown RBP14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 ZSCAN25Q6NSZ9 544 aa14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 FAM163AQ96GL9 167 aaPredicted RBP14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 CFHR5Q9BXR6 569 aa14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 PIH1D3Q9NQM4 214 aaKnown RBP14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 CEP290O15078 2479 aa14.08□□□□□ -0.16
CHMP2A-207ENST00000600804 PRDX5P30044 214 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 UBE3CQ15386 1083 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 LDLRAD1Q5T700 205 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 TBC1D9Q6ZT07 1266 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 KIAA0825Q8IV33 1275 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 SLF2Q8IX21 1173 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 FBXW7Q969H0 707 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 NSUN4Q96CB9 384 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 EDC3Q96F86 508 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 LRP2BPQ9P2M1 347 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 HDAC9Q9UKV0 1011 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
CHMP2A-207ENST00000600804 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
CHMP2A-207ENST00000600804 HIP1O00291 1037 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms