RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 HOOK2Q96ED9 719 aa21.85■■□□□ 1.09
SHKBP1-223ENST00000600552 ZFYVE28Q9HCC9 887 aa21.85■■□□□ 1.09
SHKBP1-223ENST00000600552 SNCAIPQ9Y6H5 919 aa21.85■■□□□ 1.09
SHKBP1-223ENST00000600552 TNRC18O15417 2968 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-223ENST00000600552 TIMM10P62072 90 aa21.84■■□□□ 1.09
SHKBP1-223ENST00000600552 FKBP1CQ5VVH2 108 aa21.84■■□□□ 1.09
SHKBP1-223ENST00000600552 FAM43AQ8N2R8 423 aa21.84■■□□□ 1.09
SHKBP1-223ENST00000600552 ZNF341Q9BYN7 854 aa21.84■■□□□ 1.09
SHKBP1-223ENST00000600552 DENND2AQ9ULE3 1009 aa21.84■■□□□ 1.09
SHKBP1-223ENST00000600552 SPDYE5A6NIY4 337 aa21.83■■□□□ 1.09
SHKBP1-223ENST00000600552 SRGAP3O43295 1099 aa21.83■■□□□ 1.09
SHKBP1-223ENST00000600552 ERO1BQ86YB8 467 aa21.83■■□□□ 1.09
SHKBP1-223ENST00000600552 FAM151AQ8WW52 585 aa21.83■■□□□ 1.09
SHKBP1-223ENST00000600552 FBXO3Q9UK99 471 aa21.83■■□□□ 1.09
SHKBP1-223ENST00000600552 PTPN22Q9Y2R2 807 aa21.83■■□□□ 1.09
SHKBP1-223ENST00000600552 WDHD1O75717 1129 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-223ENST00000600552 CETPP11597 493 aa21.82■■□□□ 1.08
SHKBP1-223ENST00000600552 INPP5BP32019 993 aa21.82■■□□□ 1.08
SHKBP1-223ENST00000600552 NFIAQ12857 509 aa21.82■■□□□ 1.08
SHKBP1-223ENST00000600552 ABCF2Q9UG63 623 aa21.82■■□□□ 1.08
SHKBP1-223ENST00000600552 TNNQ9UQP3 1299 aa21.82■■□□□ 1.08
SHKBP1-223ENST00000600552 IRF6O14896 467 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 GNAI3P08754 354 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 CAP1Q01518 475 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 TFCP2Q12800 502 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 SNAPC2Q13487 334 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 CCDC102BQ68D86 513 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 NEUROD6Q96NK8 337 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 COPRSQ9NQ92 184 aa21.81■■□□□ 1.08
SHKBP1-223ENST00000600552 BTBD19C9JJ37 291 aa21.8■■□□□ 1.08
SHKBP1-223ENST00000600552 DZIP1Q86YF9 867 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-223ENST00000600552 ZFPM1Q8IX07 1006 aa21.8■■□□□ 1.08
SHKBP1-223ENST00000600552 LAMB1P07942 1786 aa21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 BCAR3O75815 825 aa21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 MYCP01106 439 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 PPIL2Q13356 520 aa21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 INTS3Q68E01 1043 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 ZSCAN29Q8IWY8 852 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 FAM198AQ9UFP1 575 aa21.79■■□□□ 1.08
SHKBP1-223ENST00000600552 POTEFA5A3E0 1075 aa21.78■■□□□ 1.08
SHKBP1-223ENST00000600552 SEMA3EO15041 775 aa21.78■■□□□ 1.08
SHKBP1-223ENST00000600552 IPO8O15397 1037 aaKnown RBP21.78■■□□□ 1.08
SHKBP1-223ENST00000600552 GORABQ5T7V8 394 aa21.78■■□□□ 1.08
SHKBP1-223ENST00000600552 ARHGAP45Q92619 1136 aa21.78■■□□□ 1.08
SHKBP1-223ENST00000600552 XAGE2Q96GT9 111 aa21.78■■□□□ 1.08
SHKBP1-223ENST00000600552 MYH2Q9UKX2 1941 aa21.77■■□□□ 1.08
SHKBP1-223ENST00000600552 A0A1B0GUL7 405 aa21.77■■□□□ 1.08
SHKBP1-223ENST00000600552 RASGRF1Q13972 1273 aa21.77■■□□□ 1.08
SHKBP1-223ENST00000600552 ARHGEF6Q15052 776 aa21.77■■□□□ 1.08
SHKBP1-223ENST00000600552 ZGPATQ8N5A5 531 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-223ENST00000600552 AKAP2Q9Y2D5 859 aa21.77■■□□□ 1.08
SHKBP1-223ENST00000600552 RGS3P49796 1198 aa21.76■■□□□ 1.07
SHKBP1-223ENST00000600552 PPATQ06203 517 aa21.76■■□□□ 1.07
SHKBP1-223ENST00000600552 PICALMQ13492 652 aa21.76■■□□□ 1.07
SHKBP1-223ENST00000600552 KIF22Q14807 665 aa21.76■■□□□ 1.07
SHKBP1-223ENST00000600552 ARHGAP39Q9C0H5 1083 aa21.76■■□□□ 1.07
SHKBP1-223ENST00000600552 SALL1Q9NSC2 1324 aa21.76■■□□□ 1.07
SHKBP1-223ENST00000600552 RPAP1Q9BWH6 1393 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-223ENST00000600552 GNAI2P04899 355 aa21.75■■□□□ 1.07
SHKBP1-223ENST00000600552 TRIM27P14373 513 aa21.75■■□□□ 1.07
SHKBP1-223ENST00000600552 PTCH2Q9Y6C5 1203 aa21.75■■□□□ 1.07
SHKBP1-223ENST00000600552 TLR2O60603 784 aa21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 G3BP1Q13283 466 aaKnown RBP eCLIP21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 ATF7IPQ6VMQ6 1270 aa21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 CPA4Q9UI42 421 aa21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.74■■□□□ 1.07
SHKBP1-223ENST00000600552 BTDP43251 543 aa21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 SLC9C1Q4G0N8 1177 aa21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 PRPF38BQ5VTL8 546 aaKnown RBP21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 ERICH6Q7L0X2 663 aa21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 SLF2Q8IX21 1173 aa21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 TMEM106CQ9BVX2 250 aa21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 ZNF112Q9UJU3 913 aa21.73■■□□□ 1.07
SHKBP1-223ENST00000600552 KIAA0100Q14667 2235 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-223ENST00000600552 PDHXO00330 501 aa21.72■■□□□ 1.07
SHKBP1-223ENST00000600552 SLC34A2O95436 690 aa21.72■■□□□ 1.07
SHKBP1-223ENST00000600552 SLURP2P0DP57 97 aa21.72■■□□□ 1.07
SHKBP1-223ENST00000600552 EN2P19622 333 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-223ENST00000600552 TBC1D9Q6ZT07 1266 aa21.72■■□□□ 1.07
SHKBP1-223ENST00000600552 ZSWIM8A7E2V4 1837 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 PNMA6EA0A0J9YXQ4 647 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 MECOMQ03112 1051 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 SLC4A8Q2Y0W8 1093 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 PI16Q6UXB8 463 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 ARMC5Q96C12 935 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 PICK1Q9NRD5 415 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 RAI14Q9P0K7 980 aa21.71■■□□□ 1.07
SHKBP1-223ENST00000600552 LACTBP83111 547 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 OS9Q13438 667 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 SH3BP5LQ7L8J4 393 aa21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 NBPF11Q86T75 865 aa21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 SH3TC2Q8TF17 1288 aa21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 HMG20BQ9P0W2 317 aa21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 ZHX2Q9Y6X8 837 aa21.7■■□□□ 1.06
SHKBP1-223ENST00000600552 DDTLA6NHG4 134 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms