RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 ABCF2Q9UG63 623 aa24.4■■□□□ 1.5
ARHGEF1-217ENST00000598812 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.4■■□□□ 1.5
ARHGEF1-217ENST00000598812 ZBTB7BO15156 539 aaPredicted RBP24.39■■□□□ 1.49
ARHGEF1-217ENST00000598812 SPTY2D1Q68D10 685 aaPredicted RBP24.39■■□□□ 1.49
ARHGEF1-217ENST00000598812 DZIP1Q86YF9 867 aaKnown RBP24.39■■□□□ 1.49
ARHGEF1-217ENST00000598812 SSH3Q8TE77 659 aa24.39■■□□□ 1.49
ARHGEF1-217ENST00000598812 ELP3Q9H9T3 547 aa24.39■■□□□ 1.49
ARHGEF1-217ENST00000598812 OTOFQ9HC10 1997 aa24.39■■□□□ 1.49
ARHGEF1-217ENST00000598812 ALDH1A1P00352 501 aa24.38■■□□□ 1.49
ARHGEF1-217ENST00000598812 MAP3K9P80192 1104 aa24.38■■□□□ 1.49
ARHGEF1-217ENST00000598812 CDC42EP5Q6NZY7 148 aa24.38■■□□□ 1.49
ARHGEF1-217ENST00000598812 CSADQ9Y600 493 aa24.38■■□□□ 1.49
ARHGEF1-217ENST00000598812 RPAP1Q9BWH6 1393 aaPredicted RBP24.38■■□□□ 1.49
ARHGEF1-217ENST00000598812 SURF6O75683 361 aaKnown RBP24.37■■□□□ 1.49
ARHGEF1-217ENST00000598812 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.37■■□□□ 1.49
ARHGEF1-217ENST00000598812 SLF2Q8IX21 1173 aa24.37■■□□□ 1.49
ARHGEF1-217ENST00000598812 OPTNQ96CV9 577 aa24.37■■□□□ 1.49
ARHGEF1-217ENST00000598812 USP40Q9NVE5 1235 aa24.37■■□□□ 1.49
ARHGEF1-217ENST00000598812 MS4A1P11836 297 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 SOX10P56693 466 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 VGLL4Q14135 290 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 DCAF15Q66K64 600 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 IFNL1Q8IU54 200 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 PANK1Q8TE04 598 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 FAM151AQ8WW52 585 aa24.36■■□□□ 1.49
ARHGEF1-217ENST00000598812 GJA5P36382 358 aa24.35■■□□□ 1.49
ARHGEF1-217ENST00000598812 TCP10Q12799 353 aa24.35■■□□□ 1.49
ARHGEF1-217ENST00000598812 SPATA5Q8NB90 893 aa24.35■■□□□ 1.49
ARHGEF1-217ENST00000598812 CFHR5Q9BXR6 569 aa24.35■■□□□ 1.49
ARHGEF1-217ENST00000598812 MYH2Q9UKX2 1941 aa24.35■■□□□ 1.49
ARHGEF1-217ENST00000598812 GPR25O00155 361 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 NFIAQ12857 509 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 OTUD7BQ6GQQ9 843 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 ERICH6Q7L0X2 663 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 CTU1Q7Z7A3 348 aaKnown RBP24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 ZNF296Q8WUU4 475 aaPredicted RBP24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 WRNIP1Q96S55 665 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 GPR108Q9NPR9 543 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 HMG20BQ9P0W2 317 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 GAKO14976 1311 aa24.34■■□□□ 1.49
ARHGEF1-217ENST00000598812 UQCRFS1P1P0C7P4 283 aa24.33■■□□□ 1.49
ARHGEF1-217ENST00000598812 ARID4AP29374 1257 aaPredicted RBP24.33■■□□□ 1.49
ARHGEF1-217ENST00000598812 TNNI3KQ59H18 835 aa24.33■■□□□ 1.49
ARHGEF1-217ENST00000598812 NOM1Q5C9Z4 860 aaKnown RBP24.33■■□□□ 1.49
ARHGEF1-217ENST00000598812 FPGT-TNNI3KV9GXZ4 949 aa24.33■■□□□ 1.49
ARHGEF1-217ENST00000598812 LAMB1P07942 1786 aa24.33■■□□□ 1.49
ARHGEF1-217ENST00000598812 AK9Q5TCS8 1911 aa24.32■■□□□ 1.48
ARHGEF1-217ENST00000598812 IGF2BP3O00425 579 aaKnown RBP eCLIP24.32■■□□□ 1.48
ARHGEF1-217ENST00000598812 PRPF38BQ5VTL8 546 aaKnown RBP24.32■■□□□ 1.48
ARHGEF1-217ENST00000598812 ZNF341Q9BYN7 854 aa24.32■■□□□ 1.48
ARHGEF1-217ENST00000598812 NOP58Q9Y2X3 529 aaKnown RBP24.32■■□□□ 1.48
ARHGEF1-217ENST00000598812 MECOMQ03112 1051 aa24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 PI16Q6UXB8 463 aa24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 MIGA2Q7L4E1 593 aa24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 CNKSR2Q8WXI2 1034 aa24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 OTUD5Q96G74 571 aa24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 FAM163AQ96GL9 167 aaPredicted RBP24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 FAM198AQ9UFP1 575 aa24.31■■□□□ 1.48
ARHGEF1-217ENST00000598812 CCDC158Q5M9N0 1113 aa24.3■■□□□ 1.48
ARHGEF1-217ENST00000598812 TTC39AQ5SRH9 613 aa24.3■■□□□ 1.48
ARHGEF1-217ENST00000598812 CEP85Q6P2H3 762 aa24.3■■□□□ 1.48
ARHGEF1-217ENST00000598812 ZKSCAN4Q969J2 545 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF1-217ENST00000598812 SNCAIPQ9Y6H5 919 aa24.3■■□□□ 1.48
ARHGEF1-217ENST00000598812 MROH7-TTC4A0A0A0MT08 1334 aa24.3■■□□□ 1.48
ARHGEF1-217ENST00000598812 TESPA1A2RU30 521 aaPredicted RBP24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 SPDYE5A6NIY4 337 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 FKTNO75072 461 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 MCAMP43121 646 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 BTDP43251 543 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 RGS3P49796 1198 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 GTF2A2P52657 109 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 GSTO1P78417 241 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 TBC1D9Q6ZT07 1266 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 ERO1BQ86YB8 467 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 DBNDD2Q9BQY9 259 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 IDI2Q9BXS1 227 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 R3HDMLQ9H3Y0 253 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 RAI14Q9P0K7 980 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 RCAN3Q9UKA8 241 aa24.29■■□□□ 1.48
ARHGEF1-217ENST00000598812 LDHCP07864 332 aa24.28■■□□□ 1.48
ARHGEF1-217ENST00000598812 LRP2BPQ9P2M1 347 aa24.28■■□□□ 1.48
ARHGEF1-217ENST00000598812 CCL15-CCL14A0A0B4J2E2 113 aa24.27■■□□□ 1.48
ARHGEF1-217ENST00000598812 ENTPD3O75355 529 aa24.27■■□□□ 1.48
ARHGEF1-217ENST00000598812 CCL15Q16663 113 aa24.27■■□□□ 1.48
ARHGEF1-217ENST00000598812 MS4A4AQ96JQ5 239 aa24.27■■□□□ 1.48
ARHGEF1-217ENST00000598812 PTPN18Q99952 460 aa24.27■■□□□ 1.48
ARHGEF1-217ENST00000598812 GPR75-ASB3A0A0A6YYF3 556 aa24.26■■□□□ 1.47
ARHGEF1-217ENST00000598812 PKN2Q16513 984 aaKnown RBP24.26■■□□□ 1.47
ARHGEF1-217ENST00000598812 ZSCAN29Q8IWY8 852 aaPredicted RBP24.26■■□□□ 1.47
ARHGEF1-217ENST00000598812 ZFPM1Q8IX07 1006 aa24.26■■□□□ 1.47
ARHGEF1-217ENST00000598812 NSUN4Q96CB9 384 aaKnown RBP24.26■■□□□ 1.47
ARHGEF1-217ENST00000598812 DDX19BQ9UMR2 479 aa24.26■■□□□ 1.47
ARHGEF1-217ENST00000598812 INPP5BP32019 993 aa24.25■■□□□ 1.47
ARHGEF1-217ENST00000598812 CRHR2Q13324 411 aa24.25■■□□□ 1.47
ARHGEF1-217ENST00000598812 PICALMQ13492 652 aa24.25■■□□□ 1.47
ARHGEF1-217ENST00000598812 ERC1Q8IUD2 1116 aa24.25■■□□□ 1.47
ARHGEF1-217ENST00000598812 ZNF384Q8TF68 577 aa24.25■■□□□ 1.47
ARHGEF1-217ENST00000598812 BRI3BPQ8WY22 251 aa24.25■■□□□ 1.47
ARHGEF1-217ENST00000598812 SNRKQ9NRH2 765 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms