RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 THSD7BQ9C0I4 1608 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 FAM155AB1AL88 458 aaPredicted RBP20.47■□□□□ 0.87
SSBP4-204ENST00000597724 ZAP70P43403 619 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 PRKG1Q13976 671 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 ARMC9Q7Z3E5 817 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
SSBP4-204ENST00000597724 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
SSBP4-204ENST00000597724 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
SSBP4-204ENST00000597724 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
SSBP4-204ENST00000597724 NOGQ13253 232 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 LDLRAD1Q5T700 205 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 CDAN1Q8IWY9 1227 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 LRRCC1Q9C099 1032 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 ANGEL1Q9UNK9 670 aaKnown RBP20.46■□□□□ 0.87
SSBP4-204ENST00000597724 MROH7-TTC4A0A0A0MT08 1334 aa20.46■□□□□ 0.87
SSBP4-204ENST00000597724 LDHCP07864 332 aa20.45■□□□□ 0.86
SSBP4-204ENST00000597724 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
SSBP4-204ENST00000597724 GSTO1P78417 241 aa20.45■□□□□ 0.86
SSBP4-204ENST00000597724 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-204ENST00000597724 GPR75-ASB3A0A0A6YYF3 556 aa20.44■□□□□ 0.86
SSBP4-204ENST00000597724 IGSF3O75054 1194 aa20.44■□□□□ 0.86
SSBP4-204ENST00000597724 USP2O75604 605 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-204ENST00000597724 SLC10A3P09131 477 aa20.44■□□□□ 0.86
SSBP4-204ENST00000597724 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
SSBP4-204ENST00000597724 BCL11AQ9H165 835 aa20.44■□□□□ 0.86
SSBP4-204ENST00000597724 BTDP43251 543 aa20.43■□□□□ 0.86
SSBP4-204ENST00000597724 NFIAQ12857 509 aa20.43■□□□□ 0.86
SSBP4-204ENST00000597724 RASAL3Q86YV0 1011 aa20.43■□□□□ 0.86
SSBP4-204ENST00000597724 FAM151AQ8WW52 585 aa20.43■□□□□ 0.86
SSBP4-204ENST00000597724 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
SSBP4-204ENST00000597724 FAM198AQ9UFP1 575 aa20.43■□□□□ 0.86
SSBP4-204ENST00000597724 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
SSBP4-204ENST00000597724 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
SSBP4-204ENST00000597724 MYO5AQ9Y4I1 1855 aaKnown RBP20.42■□□□□ 0.86
SSBP4-204ENST00000597724 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-204ENST00000597724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.42■□□□□ 0.86
SSBP4-204ENST00000597724 IDI2Q9BXS1 227 aa20.42■□□□□ 0.86
SSBP4-204ENST00000597724 RPAP1Q9BWH6 1393 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-204ENST00000597724 UNCXA6NJT0 531 aa20.41■□□□□ 0.86
SSBP4-204ENST00000597724 IREB2P48200 963 aaKnown RBP20.41■□□□□ 0.86
SSBP4-204ENST00000597724 RHBDL3P58872 404 aa20.41■□□□□ 0.86
SSBP4-204ENST00000597724 TCP10Q12799 353 aa20.41■□□□□ 0.86
SSBP4-204ENST00000597724 AAMPQ13685 434 aa20.41■□□□□ 0.86
SSBP4-204ENST00000597724 NAA16Q6N069 864 aaPredicted RBP20.41■□□□□ 0.86
SSBP4-204ENST00000597724 KIF23Q02241 960 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-204ENST00000597724 ANTXR1Q9H6X2 564 aa20.4■□□□□ 0.86
SSBP4-204ENST00000597724 RFX7Q2KHR2 1363 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 FOXN1O15353 648 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 ENTPD3O75355 529 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-204ENST00000597724 MAP4K4O95819 1239 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-204ENST00000597724 ATP5JP18859 108 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 RGS3P49796 1198 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 ZFPM1Q8IX07 1006 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 AIDAQ96BJ3 306 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 HOOK2Q96ED9 719 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 SLC10A4Q96EP9 437 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.85
SSBP4-204ENST00000597724 IDH1O75874 414 aaKnown RBP20.38■□□□□ 0.85
SSBP4-204ENST00000597724 ANKRD13AQ8IZ07 590 aa20.38■□□□□ 0.85
SSBP4-204ENST00000597724 DDX4Q9NQI0 724 aaKnown RBP20.38■□□□□ 0.85
SSBP4-204ENST00000597724 PPP4CP60510 307 aa20.37■□□□□ 0.85
SSBP4-204ENST00000597724 TTF1Q15361 905 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-204ENST00000597724 ADGRA1Q86SQ6 560 aa20.37■□□□□ 0.85
SSBP4-204ENST00000597724 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
SSBP4-204ENST00000597724 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
SSBP4-204ENST00000597724 NOL10Q9BSC4 688 aaKnown RBP20.37■□□□□ 0.85
SSBP4-204ENST00000597724 BEGAINQ9BUH8 593 aa20.37■□□□□ 0.85
SSBP4-204ENST00000597724 NPM3O75607 178 aaKnown RBP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 BAG3O95817 575 aa20.36■□□□□ 0.85
SSBP4-204ENST00000597724 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
SSBP4-204ENST00000597724 HDAC1Q13547 482 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 SPRYD7Q5W111 196 aa20.36■□□□□ 0.85
SSBP4-204ENST00000597724 TMED8Q6PL24 325 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 DNAJC2Q99543 621 aaKnown RBP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSBP4-204ENST00000597724 DOCK2Q92608 1830 aa20.36■□□□□ 0.85
SSBP4-204ENST00000597724 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 GOLIM4O00461 696 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 CYP7A1P22680 504 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 PICALMQ13492 652 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 SH3BP5LQ7L8J4 393 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-204ENST00000597724 SH3RF3Q8TEJ3 882 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-204ENST00000597724 BOLA2Q9H3K6 86 aa20.35■□□□□ 0.85
SSBP4-204ENST00000597724 OTOFQ9HC10 1997 aa20.34■□□□□ 0.85
SSBP4-204ENST00000597724 PLCG2P16885 1265 aa20.34■□□□□ 0.85
SSBP4-204ENST00000597724 CTCFP49711 727 aaPredicted RBP20.34■□□□□ 0.85
SSBP4-204ENST00000597724 MIGA2Q7L4E1 593 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms