RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CTGFP29279 349 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 RFX5P48382 616 aaPredicted RBP12.52□□□□□ -0.41
LIG1-209ENST00000596104 PPATQ06203 517 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 DCAF15Q66K64 600 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 ZNF341Q9BYN7 854 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
LIG1-209ENST00000596104 EYA2O00167 538 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
LIG1-209ENST00000596104 PRMT2P55345 433 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 MOGSQ13724 837 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 KIF22Q14807 665 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 MIGA2Q7L4E1 593 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
LIG1-209ENST00000596104 FAM151AQ8WW52 585 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
LIG1-209ENST00000596104 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 PTPRCP08575 1304 aa12.51□□□□□ -0.41
LIG1-209ENST00000596104 NFIAQ12857 509 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 ANKRD23Q86SG2 305 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 FAM9BQ8IZU0 186 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 LPIN2Q92539 896 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 SHISA4Q96DD7 197 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 CPA4Q9UI42 421 aa12.5□□□□□ -0.41
LIG1-209ENST00000596104 H0YGN5 161 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 PDHXO00330 501 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 SLC5A1P13866 664 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 PRDX5P30044 214 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 PSMC4P43686 418 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 TCP10Q12799 353 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 MTFR1Q15390 333 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 DIXDC1Q155Q3 683 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
LIG1-209ENST00000596104 CDC42EP5Q6NZY7 148 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 ATG9AQ7Z3C6 839 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 FAM198AQ9UFP1 575 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 SRRDQ9UH36 339 aa12.49□□□□□ -0.41
LIG1-209ENST00000596104 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
LIG1-209ENST00000596104 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
LIG1-209ENST00000596104 OSBPP22059 807 aa12.48□□□□□ -0.41
LIG1-209ENST00000596104 ZSWIM8A7E2V4 1837 aa12.48□□□□□ -0.41
LIG1-209ENST00000596104 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
LIG1-209ENST00000596104 UBE2Q1Q7Z7E8 422 aa12.47□□□□□ -0.41
LIG1-209ENST00000596104 ZFPM1Q8IX07 1006 aa12.47□□□□□ -0.41
LIG1-209ENST00000596104 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 CXCL11O14625 94 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 ZBTB22O15209 634 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 CIAO1O76071 339 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 BCRP11274 1271 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 HOXD10P28358 340 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 GRK4P32298 578 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
LIG1-209ENST00000596104 RFX7Q2KHR2 1363 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 E9PSI1 815 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
LIG1-209ENST00000596104 LDHBP07195 334 aaKnown RBP12.45□□□□□ -0.42
LIG1-209ENST00000596104 GJB1P08034 283 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
LIG1-209ENST00000596104 PHKA1P46020 1223 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 GJA8P48165 433 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
LIG1-209ENST00000596104 PARK7Q99497 189 aaKnown RBP12.45□□□□□ -0.42
LIG1-209ENST00000596104 GAKO14976 1311 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 SEMA3EO15041 775 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 CYP2C8P10632 490 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 CCL5P13501 91 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 MAP3K10Q02779 954 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 PRKCZQ05513 592 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 SLFN5Q08AF3 891 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 SH3BP5LQ7L8J4 393 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 SCYL3Q8IZE3 742 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 NKX2-3Q8TAU0 364 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 IDI2Q9BXS1 227 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 SIL1Q9H173 461 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 CEP126Q9P2H0 1117 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 DENND2AQ9ULE3 1009 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 CEP290O15078 2479 aa12.44□□□□□ -0.42
LIG1-209ENST00000596104 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 A0A0G2JLL6 359 aaPredicted RBP12.43□□□□□ -0.42
LIG1-209ENST00000596104 ENTPD3O75355 529 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 UBTFL1P0CB47 393 aaPredicted RBP12.43□□□□□ -0.42
LIG1-209ENST00000596104 PTPRAP18433 802 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 RGS3P49796 1198 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 FCGRTP55899 365 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 PRRT2Q7Z6L0 340 aaPredicted RBP12.43□□□□□ -0.42
LIG1-209ENST00000596104 GNL3LQ9NVN8 582 aaKnown RBP12.43□□□□□ -0.42
LIG1-209ENST00000596104 GABRQQ9UN88 632 aa12.43□□□□□ -0.42
LIG1-209ENST00000596104 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
LIG1-209ENST00000596104 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms