RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 ANKRD13AQ8IZ07 590 aa12.74□□□□□ -0.37
SHKBP1-210ENST00000595874 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
SHKBP1-210ENST00000595874 TM4SF4P48230 202 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 MAP3K11Q16584 847 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 WRNIP1Q96S55 665 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 AKAP2Q9Y2D5 859 aa12.73□□□□□ -0.37
SHKBP1-210ENST00000595874 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 GPR25O00155 361 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 INPP5BP32019 993 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 BTDP43251 543 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 ATP8B2P98198 1209 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 HDLBPQ00341 1268 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 MTX1Q13505 466 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 HHIPL2Q6UWX4 724 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 DBNDD2Q9BQY9 259 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 HMG20BQ9P0W2 317 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 CSADQ9Y600 493 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
SHKBP1-210ENST00000595874 FAM196BA6NMK8 535 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 RGS3P49796 1198 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 PTPN18Q99952 460 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 SNCAIPQ9Y6H5 919 aa12.71□□□□□ -0.37
SHKBP1-210ENST00000595874 CCL15-CCL14A0A0B4J2E2 113 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 FKTNO75072 461 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 MCAMP43121 646 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 MECOMQ03112 1051 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 POLA2Q14181 598 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 CCL15Q16663 113 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 TNNI3KQ59H18 835 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 CD99L2Q8TCZ2 262 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 FAM151AQ8WW52 585 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 BRI3BPQ8WY22 251 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 SUGT1Q9Y2Z0 365 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 FPGT-TNNI3KV9GXZ4 949 aa12.7□□□□□ -0.38
SHKBP1-210ENST00000595874 SEMA3EO15041 775 aa12.69□□□□□ -0.38
SHKBP1-210ENST00000595874 ZBTB48P10074 688 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-210ENST00000595874 CRHR2Q13324 411 aa12.69□□□□□ -0.38
SHKBP1-210ENST00000595874 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
SHKBP1-210ENST00000595874 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
SHKBP1-210ENST00000595874 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
SHKBP1-210ENST00000595874 MROH7-TTC4A0A0A0MT08 1334 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 ZSWIM8A7E2V4 1837 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 C20orf194Q5TEA3 1177 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 DCAF15Q66K64 600 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 FAM83AQ86UY5 434 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 HPS5Q9UPZ3 1129 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
SHKBP1-210ENST00000595874 DOCK2Q92608 1830 aa12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 IRF6O14896 467 aa12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 ZAP70P43403 619 aa12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 CAP1Q01518 475 aa12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 SPTY2D1Q68D10 685 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 ZGPATQ8N5A5 531 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
SHKBP1-210ENST00000595874 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
SHKBP1-210ENST00000595874 GAKO14976 1311 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms