RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 IFFO2Q5TF58 517 aa27.47■■□□□ 1.99
GTF2F1-204ENST00000594965 RPAP2Q8IXW5 612 aaPredicted RBP27.47■■□□□ 1.99
GTF2F1-204ENST00000594965 EAF2Q96CJ1 260 aaPredicted RBP27.47■■□□□ 1.99
GTF2F1-204ENST00000594965 CLMNQ96JQ2 1002 aa27.47■■□□□ 1.99
GTF2F1-204ENST00000594965 UQCRFS1P1P0C7P4 283 aa27.46■■□□□ 1.99
GTF2F1-204ENST00000594965 TBC1D9Q6ZT07 1266 aa27.46■■□□□ 1.99
GTF2F1-204ENST00000594965 ZNF384Q8TF68 577 aa27.46■■□□□ 1.99
GTF2F1-204ENST00000594965 UNCXA6NJT0 531 aa27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 IREB2P48200 963 aaKnown RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 MKRN3Q13064 507 aaKnown RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 SPTY2D1Q68D10 685 aaPredicted RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 ERICH6Q7L0X2 663 aa27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 DZIP1Q86YF9 867 aaKnown RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 REM2Q8IYK8 340 aaPredicted RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 TNS4Q8IZW8 715 aa27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 CCDC8Q9H0W5 538 aaPredicted RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 RNF186Q9NXI6 227 aa27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 TLR7Q9NYK1 1049 aaKnown RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 DBNLQ9UJU6 430 aaKnown RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 RPAP1Q9BWH6 1393 aaPredicted RBP27.45■■□□□ 1.98
GTF2F1-204ENST00000594965 NFIAQ12857 509 aa27.44■■□□□ 1.98
GTF2F1-204ENST00000594965 SPRYD7Q5W111 196 aa27.44■■□□□ 1.98
GTF2F1-204ENST00000594965 FAM163AQ96GL9 167 aaPredicted RBP27.44■■□□□ 1.98
GTF2F1-204ENST00000594965 USP40Q9NVE5 1235 aa27.44■■□□□ 1.98
GTF2F1-204ENST00000594965 MAST2Q6P0Q8 1798 aa27.44■■□□□ 1.98
GTF2F1-204ENST00000594965 MECOMQ03112 1051 aa27.43■■□□□ 1.98
GTF2F1-204ENST00000594965 TTC39AQ5SRH9 613 aa27.43■■□□□ 1.98
GTF2F1-204ENST00000594965 SLC10A4Q96EP9 437 aa27.43■■□□□ 1.98
GTF2F1-204ENST00000594965 SAGE1Q9NXZ1 904 aa27.43■■□□□ 1.98
GTF2F1-204ENST00000594965 FAM198AQ9UFP1 575 aa27.43■■□□□ 1.98
GTF2F1-204ENST00000594965 CCDC158Q5M9N0 1113 aa27.42■■□□□ 1.98
GTF2F1-204ENST00000594965 ANKRD13AQ8IZ07 590 aa27.42■■□□□ 1.98
GTF2F1-204ENST00000594965 ZNF512BQ96KM6 892 aaPredicted RBP27.42■■□□□ 1.98
GTF2F1-204ENST00000594965 CHMP4BQ9H444 224 aaKnown RBP27.42■■□□□ 1.98
GTF2F1-204ENST00000594965 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.42■■□□□ 1.98
GTF2F1-204ENST00000594965 DOCK2Q92608 1830 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 RFX7Q2KHR2 1363 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 TRPA1O75762 1119 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 TM4SF4P48230 202 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 ERC1Q8IUD2 1116 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 FAM151AQ8WW52 585 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 NSUN4Q96CB9 384 aaKnown RBP27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 WNK4Q96J92 1243 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 SNRKQ9NRH2 765 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 MROH7-TTC4A0A0A0MT08 1334 aa27.41■■□□□ 1.98
GTF2F1-204ENST00000594965 TCP10Q12799 353 aa27.4■■□□□ 1.98
GTF2F1-204ENST00000594965 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.4■■□□□ 1.98
GTF2F1-204ENST00000594965 RHPN1Q8TCX5 695 aa27.4■■□□□ 1.98
GTF2F1-204ENST00000594965 YTHDC1Q96MU7 727 aaKnown RBP27.4■■□□□ 1.98
GTF2F1-204ENST00000594965 GJA5P36382 358 aa27.39■■□□□ 1.98
GTF2F1-204ENST00000594965 ZFPM1Q8IX07 1006 aa27.39■■□□□ 1.98
GTF2F1-204ENST00000594965 SLF2Q8IX21 1173 aa27.39■■□□□ 1.98
GTF2F1-204ENST00000594965 CDK5RAP2Q96SN8 1893 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 GPR75-ASB3A0A0A6YYF3 556 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 HMMRO75330 724 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 CYP2E1P05181 493 aaPredicted RBP27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 BTDP43251 543 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 HSP90AB4PQ58FF6 505 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 IDI2Q9BXS1 227 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 IL1RAPL2Q9NP60 686 aa27.38■■□□□ 1.97
GTF2F1-204ENST00000594965 ZBTB48P10074 688 aaPredicted RBP27.37■■□□□ 1.97
GTF2F1-204ENST00000594965 MAP3K9P80192 1104 aa27.37■■□□□ 1.97
GTF2F1-204ENST00000594965 AACSQ86V21 672 aa27.37■■□□□ 1.97
GTF2F1-204ENST00000594965 ELP3Q9H9T3 547 aa27.37■■□□□ 1.97
GTF2F1-204ENST00000594965 RAI14Q9P0K7 980 aa27.37■■□□□ 1.97
GTF2F1-204ENST00000594965 ZAP70P43403 619 aa27.36■■□□□ 1.97
GTF2F1-204ENST00000594965 RHBDL3P58872 404 aa27.36■■□□□ 1.97
GTF2F1-204ENST00000594965 VGLL4Q14135 290 aa27.36■■□□□ 1.97
GTF2F1-204ENST00000594965 LRP2BPQ9P2M1 347 aa27.36■■□□□ 1.97
GTF2F1-204ENST00000594965 WDHD1O75717 1129 aaPredicted RBP27.35■■□□□ 1.97
GTF2F1-204ENST00000594965 RGS3P49796 1198 aa27.35■■□□□ 1.97
GTF2F1-204ENST00000594965 MIGA2Q7L4E1 593 aa27.35■■□□□ 1.97
GTF2F1-204ENST00000594965 APBB1O00213 710 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 ENTPD3O75355 529 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 LDHCP07864 332 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 GSTO1P78417 241 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 SREBF2Q12772 1141 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 CNKSR2Q8WXI2 1034 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 HOOK2Q96ED9 719 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 KIF1BPQ96EK5 621 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 DDX4Q9NQI0 724 aaKnown RBP27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 FOCADQ5VW36 1801 aa27.34■■□□□ 1.97
GTF2F1-204ENST00000594965 MANSC4A6NHS7 340 aaPredicted RBP27.33■■□□□ 1.97
GTF2F1-204ENST00000594965 SH3BP5LQ7L8J4 393 aa27.33■■□□□ 1.97
GTF2F1-204ENST00000594965 OPTNQ96CV9 577 aa27.33■■□□□ 1.97
GTF2F1-204ENST00000594965 PIH1D3Q9NQM4 214 aaKnown RBP27.33■■□□□ 1.97
GTF2F1-204ENST00000594965 DCAF15Q66K64 600 aa27.32■■□□□ 1.96
GTF2F1-204ENST00000594965 WRNIP1Q96S55 665 aa27.32■■□□□ 1.96
GTF2F1-204ENST00000594965 SNCAIPQ9Y6H5 919 aa27.32■■□□□ 1.96
GTF2F1-204ENST00000594965 NDUFB9Q9Y6M9 179 aa27.32■■□□□ 1.96
GTF2F1-204ENST00000594965 ATRNL1Q5VV63 1379 aa27.32■■□□□ 1.96
GTF2F1-204ENST00000594965 RAB11FIP3O75154 756 aa27.31■■□□□ 1.96
GTF2F1-204ENST00000594965 RRP1P56182 461 aaKnown RBP27.31■■□□□ 1.96
GTF2F1-204ENST00000594965 ZKSCAN4Q969J2 545 aaPredicted RBP27.31■■□□□ 1.96
GTF2F1-204ENST00000594965 ZNF341Q9BYN7 854 aa27.31■■□□□ 1.96
GTF2F1-204ENST00000594965 TBC1D8O95759 1140 aa27.3■■□□□ 1.96
GTF2F1-204ENST00000594965 NAA16Q6N069 864 aaPredicted RBP27.3■■□□□ 1.96
GTF2F1-204ENST00000594965 ADGRA1Q86SQ6 560 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms