RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ATP8B2P98198 1209 aa29■■■□□ 2.23
LSM4-204ENST00000594828 NOM1Q5C9Z4 860 aaKnown RBP29■■■□□ 2.23
LSM4-204ENST00000594828 GORABQ5T7V8 394 aa29■■■□□ 2.23
LSM4-204ENST00000594828 CTU1Q7Z7A3 348 aaKnown RBP29■■■□□ 2.23
LSM4-204ENST00000594828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29■■■□□ 2.23
LSM4-204ENST00000594828 ABCF2Q9UG63 623 aa29■■■□□ 2.23
LSM4-204ENST00000594828 CSADQ9Y600 493 aa29■■■□□ 2.23
LSM4-204ENST00000594828 RLBP1P12271 317 aa28.99■■■□□ 2.23
LSM4-204ENST00000594828 VGLL4Q14135 290 aa28.99■■■□□ 2.23
LSM4-204ENST00000594828 POLA2Q14181 598 aa28.99■■■□□ 2.23
LSM4-204ENST00000594828 FAM151AQ8WW52 585 aa28.99■■■□□ 2.23
LSM4-204ENST00000594828 USP40Q9NVE5 1235 aa28.99■■■□□ 2.23
LSM4-204ENST00000594828 ZBTB7BO15156 539 aaPredicted RBP28.98■■■□□ 2.23
LSM4-204ENST00000594828 SPTY2D1Q68D10 685 aaPredicted RBP28.98■■■□□ 2.23
LSM4-204ENST00000594828 R3HDMLQ9H3Y0 253 aa28.98■■■□□ 2.23
LSM4-204ENST00000594828 IGF2BP3O00425 579 aaKnown RBP eCLIP28.97■■■□□ 2.23
LSM4-204ENST00000594828 TCP10Q12799 353 aa28.97■■■□□ 2.23
LSM4-204ENST00000594828 DCAF15Q66K64 600 aa28.97■■■□□ 2.23
LSM4-204ENST00000594828 OTUD7BQ6GQQ9 843 aa28.97■■■□□ 2.23
LSM4-204ENST00000594828 DZIP1Q86YF9 867 aaKnown RBP28.97■■■□□ 2.23
LSM4-204ENST00000594828 SSH3Q8TE77 659 aa28.97■■■□□ 2.23
LSM4-204ENST00000594828 C1orf115Q9H7X2 142 aa28.97■■■□□ 2.23
LSM4-204ENST00000594828 SLF2Q8IX21 1173 aa28.96■■■□□ 2.23
LSM4-204ENST00000594828 RPAP1Q9BWH6 1393 aaPredicted RBP28.96■■■□□ 2.23
LSM4-204ENST00000594828 OTOFQ9HC10 1997 aa28.95■■■□□ 2.23
LSM4-204ENST00000594828 TESPA1A2RU30 521 aaPredicted RBP28.95■■■□□ 2.22
LSM4-204ENST00000594828 FKTNO75072 461 aa28.95■■■□□ 2.22
LSM4-204ENST00000594828 NFIAQ12857 509 aa28.95■■■□□ 2.22
LSM4-204ENST00000594828 CNKSR2Q8WXI2 1034 aa28.95■■■□□ 2.22
LSM4-204ENST00000594828 WRNIP1Q96S55 665 aa28.95■■■□□ 2.22
LSM4-204ENST00000594828 OS9Q13438 667 aaPredicted RBP28.94■■■□□ 2.22
LSM4-204ENST00000594828 ERICH6Q7L0X2 663 aa28.94■■■□□ 2.22
LSM4-204ENST00000594828 MIGA2Q7L4E1 593 aa28.94■■■□□ 2.22
LSM4-204ENST00000594828 HMG20BQ9P0W2 317 aa28.94■■■□□ 2.22
LSM4-204ENST00000594828 SURF6O75683 361 aaKnown RBP28.93■■■□□ 2.22
LSM4-204ENST00000594828 SPATA5Q8NB90 893 aa28.93■■■□□ 2.22
LSM4-204ENST00000594828 FAM163AQ96GL9 167 aaPredicted RBP28.93■■■□□ 2.22
LSM4-204ENST00000594828 MS4A4AQ96JQ5 239 aa28.93■■■□□ 2.22
LSM4-204ENST00000594828 PTPN18Q99952 460 aa28.93■■■□□ 2.22
LSM4-204ENST00000594828 ZNF341Q9BYN7 854 aa28.93■■■□□ 2.22
LSM4-204ENST00000594828 FAM198AQ9UFP1 575 aa28.93■■■□□ 2.22
LSM4-204ENST00000594828 GAKO14976 1311 aa28.93■■■□□ 2.22
LSM4-204ENST00000594828 PKN2Q16513 984 aaKnown RBP28.92■■■□□ 2.22
LSM4-204ENST00000594828 ZKSCAN4Q969J2 545 aaPredicted RBP28.92■■■□□ 2.22
LSM4-204ENST00000594828 OTUD5Q96G74 571 aa28.92■■■□□ 2.22
LSM4-204ENST00000594828 GPR108Q9NPR9 543 aa28.92■■■□□ 2.22
LSM4-204ENST00000594828 LAMB1P07942 1786 aa28.91■■■□□ 2.22
LSM4-204ENST00000594828 ARID4AP29374 1257 aaPredicted RBP28.91■■■□□ 2.22
LSM4-204ENST00000594828 GTF2A2P52657 109 aa28.91■■■□□ 2.22
LSM4-204ENST00000594828 PANK1Q8TE04 598 aa28.91■■■□□ 2.22
LSM4-204ENST00000594828 SNCAIPQ9Y6H5 919 aa28.91■■■□□ 2.22
LSM4-204ENST00000594828 SPDYE5A6NIY4 337 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 UQCRFS1P1P0C7P4 283 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 MECOMQ03112 1051 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 TNNI3KQ59H18 835 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 PI16Q6UXB8 463 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 ERO1BQ86YB8 467 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 IDI2Q9BXS1 227 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 FPGT-TNNI3KV9GXZ4 949 aa28.9■■■□□ 2.22
LSM4-204ENST00000594828 MYH2Q9UKX2 1941 aa28.89■■■□□ 2.22
LSM4-204ENST00000594828 ZFPM1Q8IX07 1006 aa28.89■■■□□ 2.22
LSM4-204ENST00000594828 NOP58Q9Y2X3 529 aaKnown RBP28.89■■■□□ 2.22
LSM4-204ENST00000594828 CCL15-CCL14A0A0B4J2E2 113 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 MS4A1P11836 297 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 BTDP43251 543 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 CCL15Q16663 113 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 TBC1D9Q6ZT07 1266 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 BRI3BPQ8WY22 251 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 MROH7-TTC4A0A0A0MT08 1334 aa28.88■■■□□ 2.21
LSM4-204ENST00000594828 ENTPD3O75355 529 aa28.87■■■□□ 2.21
LSM4-204ENST00000594828 MCAMP43121 646 aa28.87■■■□□ 2.21
LSM4-204ENST00000594828 RGS3P49796 1198 aa28.87■■■□□ 2.21
LSM4-204ENST00000594828 CRHR2Q13324 411 aa28.87■■■□□ 2.21
LSM4-204ENST00000594828 CCDC158Q5M9N0 1113 aa28.87■■■□□ 2.21
LSM4-204ENST00000594828 ZNF112Q9UJU3 913 aa28.87■■■□□ 2.21
LSM4-204ENST00000594828 LDHCP07864 332 aa28.86■■■□□ 2.21
LSM4-204ENST00000594828 INPP5BP32019 993 aa28.86■■■□□ 2.21
LSM4-204ENST00000594828 GSTO1P78417 241 aa28.86■■■□□ 2.21
LSM4-204ENST00000594828 TTC39AQ5SRH9 613 aa28.86■■■□□ 2.21
LSM4-204ENST00000594828 RAI14Q9P0K7 980 aa28.86■■■□□ 2.21
LSM4-204ENST00000594828 AK9Q5TCS8 1911 aa28.85■■■□□ 2.21
LSM4-204ENST00000594828 GPR75-ASB3A0A0A6YYF3 556 aa28.85■■■□□ 2.21
LSM4-204ENST00000594828 RGS19P49795 217 aa28.85■■■□□ 2.21
LSM4-204ENST00000594828 CEP85Q6P2H3 762 aa28.85■■■□□ 2.21
LSM4-204ENST00000594828 ZNF384Q8TF68 577 aa28.85■■■□□ 2.21
LSM4-204ENST00000594828 NSUN4Q96CB9 384 aaKnown RBP28.85■■■□□ 2.21
LSM4-204ENST00000594828 DBNDD2Q9BQY9 259 aa28.85■■■□□ 2.21
LSM4-204ENST00000594828 IRF6O14896 467 aa28.84■■■□□ 2.21
LSM4-204ENST00000594828 WDHD1O75717 1129 aaPredicted RBP28.84■■■□□ 2.21
LSM4-204ENST00000594828 CETPP11597 493 aa28.84■■■□□ 2.21
LSM4-204ENST00000594828 PPATQ06203 517 aa28.84■■■□□ 2.21
LSM4-204ENST00000594828 PPIL2Q13356 520 aa28.84■■■□□ 2.21
LSM4-204ENST00000594828 ZSCAN29Q8IWY8 852 aaPredicted RBP28.84■■■□□ 2.21
LSM4-204ENST00000594828 LRP2BPQ9P2M1 347 aa28.84■■■□□ 2.21
LSM4-204ENST00000594828 HPS5Q9UPZ3 1129 aa28.84■■■□□ 2.21
LSM4-204ENST00000594828 SNAPC2Q13487 334 aa28.83■■■□□ 2.21
LSM4-204ENST00000594828 PICALMQ13492 652 aa28.82■■■□□ 2.2
LSM4-204ENST00000594828 FBXO46Q6PJ61 603 aaPredicted RBP28.82■■■□□ 2.2
LSM4-204ENST00000594828 SNRKQ9NRH2 765 aa28.82■■■□□ 2.2
LSM4-204ENST00000594828 RFX7Q2KHR2 1363 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms