RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PDHXO00330 501 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 TNPO2O14787 897 aaKnown RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 IRF6O14896 467 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 CYP2C8P10632 490 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 PTPN5P54829 565 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 RTP1P59025 263 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 IRF5Q13568 498 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 ST3GAL2Q16842 350 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 MTHFSDQ2M296 383 aaKnown RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 DACT2Q5SW24 774 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 KRT40Q6A162 431 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 KIAA0825Q8IV33 1275 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 ZNF34Q8IZ26 560 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 OGFOD1Q8N543 542 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 PUS7Q96PZ0 661 aaKnown RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 PBX4Q9BYU1 374 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 VEZTQ9HBM0 779 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 HMX1Q9NP08 348 aaPredicted RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 ATP11BQ9Y2G3 1177 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 GCN1Q92616 2671 aaKnown RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 ASH1LQ9NR48 2969 aaKnown RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 ASPMQ8IZT6 3477 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 FLNBO75369 2602 aaKnown RBP4.21□□□□□ -1.74
VRK3-204ENST00000593912 RLFQ13129 1914 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 PLXNB2O15031 1838 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 ZNF804BA4D1E1 1349 aa4.21□□□□□ -1.74
VRK3-204ENST00000593912 KMT2EQ8IZD2 1858 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 FAM208BQ5VWN6 2430 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 BRWD1Q9NSI6 2320 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 ATRNL1Q5VV63 1379 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.2□□□□□ -1.74
VRK3-204ENST00000593912 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.2□□□□□ -1.74
VRK3-204ENST00000593912 TRIM43BA6NCK2 446 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 SPDYE5A6NIY4 337 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 CYSRT1A8MQ03 144 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 HMGCRP04035 888 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 HMOX1P09601 288 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 SSTR3P32745 418 aaPredicted RBP4.2□□□□□ -1.74
VRK3-204ENST00000593912 TEFQ10587 303 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 SUPT20HL1Q3ZLR7 823 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 SLC10A5Q5PT55 438 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 CCDC129Q6ZRS4 1044 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 PPP1R42Q7Z4L9 355 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.2□□□□□ -1.74
VRK3-204ENST00000593912 IL17REQ8NFR9 667 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 TRIM43Q96BQ3 446 aaPredicted RBP4.2□□□□□ -1.74
VRK3-204ENST00000593912 TESK2Q96S53 571 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 ZCCHC17Q9NP64 241 aaKnown RBP4.2□□□□□ -1.74
VRK3-204ENST00000593912 SNCAIPQ9Y6H5 919 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 ARAP2Q8WZ64 1704 aa4.2□□□□□ -1.74
VRK3-204ENST00000593912 ERVV-1B6SEH8 477 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 RFXAPO00287 272 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 MAP3K9P80192 1104 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 SNAPC2Q13487 334 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 RASA3Q14644 834 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 KIF6Q6ZMV9 814 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 TMC4Q7Z404 712 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 ANKRD23Q86SG2 305 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 GJD3Q8N144 294 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 MTMR14Q8NCE2 650 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.19□□□□□ -1.74
VRK3-204ENST00000593912 TRIB2Q92519 343 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 ZKSCAN4Q969J2 545 aaPredicted RBP4.19□□□□□ -1.74
VRK3-204ENST00000593912 UTP14AQ9BVJ6 771 aaKnown RBP4.19□□□□□ -1.74
VRK3-204ENST00000593912 CARD11Q9BXL7 1154 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 NKX2-4Q9H2Z4 354 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 PDLIM7Q9NR12 457 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 BSDC1Q9NW68 430 aaPredicted RBP4.19□□□□□ -1.74
VRK3-204ENST00000593912 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 CSADQ9Y600 493 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 CACNA1HO95180 2353 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 GVINP1Q7Z2Y8 2422 aa4.19□□□□□ -1.74
VRK3-204ENST00000593912 SPEGQ15772 3267 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 BTBD11A6QL63 1104 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 DCXO43602 365 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 ALADP13716 330 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 PRKAR2AP13861 404 aaKnown RBP4.18□□□□□ -1.74
VRK3-204ENST00000593912 MYL6BP14649 208 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 CCND3P30281 292 aaPredicted RBP4.18□□□□□ -1.74
VRK3-204ENST00000593912 FXR2P51116 673 aaKnown RBP eCLIP4.18□□□□□ -1.74
VRK3-204ENST00000593912 PPIL2Q13356 520 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 MOGSQ13724 837 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 DLGAP5Q15398 846 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 SAMD1Q6SPF0 538 aaPredicted RBP4.18□□□□□ -1.74
VRK3-204ENST00000593912 DGLUCYQ7Z3D6 616 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 FAM178BQ8IXR5 827 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 RMDN1Q96DB5 314 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 ALG13Q9NP73 1137 aaKnown RBP4.18□□□□□ -1.74
VRK3-204ENST00000593912 ANKIB1Q9P2G1 1089 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 GGA1Q9UJY5 639 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 TRPC6Q9Y210 931 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 YBX2Q9Y2T7 364 aaKnown RBP4.18□□□□□ -1.74
VRK3-204ENST00000593912 RRP7AQ9Y3A4 280 aaKnown RBP4.18□□□□□ -1.74
VRK3-204ENST00000593912 DAGLAQ9Y4D2 1042 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 TECTAO75443 2155 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 SPEF2Q9C093 1822 aa4.18□□□□□ -1.74
VRK3-204ENST00000593912 SPTBN2O15020 2390 aa4.17□□□□□ -1.74
VRK3-204ENST00000593912 ZFYVE26Q68DK2 2539 aa4.17□□□□□ -1.74
VRK3-204ENST00000593912 POTEB3A0JP26 581 aa4.17□□□□□ -1.74
VRK3-204ENST00000593912 PRR23AA6NEV1 266 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms