RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.61■■□□□ 1.53
COPE-204ENST00000593827 SREBF2Q12772 1141 aa24.6■■□□□ 1.53
COPE-204ENST00000593827 FAM163AQ96GL9 167 aaPredicted RBP24.6■■□□□ 1.53
COPE-204ENST00000593827 ZNF512BQ96KM6 892 aaPredicted RBP24.6■■□□□ 1.53
COPE-204ENST00000593827 DCAF15Q66K64 600 aa24.59■■□□□ 1.53
COPE-204ENST00000593827 USP40Q9NVE5 1235 aa24.59■■□□□ 1.53
COPE-204ENST00000593827 EXOC6BQ9Y2D4 811 aa24.59■■□□□ 1.53
COPE-204ENST00000593827 RPAP1Q9BWH6 1393 aaPredicted RBP24.58■■□□□ 1.53
COPE-204ENST00000593827 RAB11FIP3O75154 756 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 MAP4K4O95819 1239 aaPredicted RBP24.58■■□□□ 1.53
COPE-204ENST00000593827 CACNB3P54284 484 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 CDC42EP5Q6NZY7 148 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 FAM151AQ8WW52 585 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 KIF1BPQ96EK5 621 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 TEPSINQ96N21 525 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 CSRNP1Q96S65 589 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 ZIC5Q96T25 663 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 DBNDD2Q9BQY9 259 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 LRP2BPQ9P2M1 347 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 MYH13Q9UKX3 1938 aa24.58■■□□□ 1.53
COPE-204ENST00000593827 GAKO14976 1311 aa24.58■■□□□ 1.52
COPE-204ENST00000593827 USP2O75604 605 aaPredicted RBP24.57■■□□□ 1.52
COPE-204ENST00000593827 ZBTB48P10074 688 aaPredicted RBP24.57■■□□□ 1.52
COPE-204ENST00000593827 MCAMP43121 646 aa24.57■■□□□ 1.52
COPE-204ENST00000593827 INHBEP58166 350 aa24.57■■□□□ 1.52
COPE-204ENST00000593827 RAI14Q9P0K7 980 aa24.57■■□□□ 1.52
COPE-204ENST00000593827 SSC5DA1L4H1 1573 aa24.56■■□□□ 1.52
COPE-204ENST00000593827 SPRYD7Q5W111 196 aa24.56■■□□□ 1.52
COPE-204ENST00000593827 CLASRPQ8N2M8 674 aaKnown RBP24.56■■□□□ 1.52
COPE-204ENST00000593827 YTHDC1Q96MU7 727 aaKnown RBP24.56■■□□□ 1.52
COPE-204ENST00000593827 NOL10Q9BSC4 688 aaKnown RBP24.56■■□□□ 1.52
COPE-204ENST00000593827 CSADQ9Y600 493 aa24.56■■□□□ 1.52
COPE-204ENST00000593827 MROH7-TTC4A0A0A0MT08 1334 aa24.56■■□□□ 1.52
COPE-204ENST00000593827 MECOMQ03112 1051 aa24.55■■□□□ 1.52
COPE-204ENST00000593827 AACSQ86V21 672 aa24.55■■□□□ 1.52
COPE-204ENST00000593827 MANSC4A6NHS7 340 aaPredicted RBP24.54■■□□□ 1.52
COPE-204ENST00000593827 MAP3K9P80192 1104 aa24.54■■□□□ 1.52
COPE-204ENST00000593827 C20orf194Q5TEA3 1177 aa24.54■■□□□ 1.52
COPE-204ENST00000593827 RHPN1Q8TCX5 695 aa24.54■■□□□ 1.52
COPE-204ENST00000593827 EAF2Q96CJ1 260 aaPredicted RBP24.54■■□□□ 1.52
COPE-204ENST00000593827 IDI2Q9BXS1 227 aa24.54■■□□□ 1.52
COPE-204ENST00000593827 CCDC8Q9H0W5 538 aaPredicted RBP24.54■■□□□ 1.52
COPE-204ENST00000593827 RNF186Q9NXI6 227 aa24.54■■□□□ 1.52
COPE-204ENST00000593827 DBNLQ9UJU6 430 aaKnown RBP24.54■■□□□ 1.52
COPE-204ENST00000593827 ENTPD3O75355 529 aa24.53■■□□□ 1.52
COPE-204ENST00000593827 BTDP43251 543 aa24.53■■□□□ 1.52
COPE-204ENST00000593827 TM4SF4P48230 202 aa24.53■■□□□ 1.52
COPE-204ENST00000593827 PI16Q6UXB8 463 aa24.53■■□□□ 1.52
COPE-204ENST00000593827 NSUN4Q96CB9 384 aaKnown RBP24.53■■□□□ 1.52
COPE-204ENST00000593827 FZD1Q9UP38 647 aa24.53■■□□□ 1.52
COPE-204ENST00000593827 GPR75-ASB3A0A0A6YYF3 556 aa24.52■■□□□ 1.52
COPE-204ENST00000593827 TRPA1O75762 1119 aa24.52■■□□□ 1.52
COPE-204ENST00000593827 ALDH1A1P00352 501 aa24.52■■□□□ 1.52
COPE-204ENST00000593827 TMED8Q6PL24 325 aaPredicted RBP24.52■■□□□ 1.52
COPE-204ENST00000593827 TBC1D9Q6ZT07 1266 aa24.52■■□□□ 1.52
COPE-204ENST00000593827 WNK4Q96J92 1243 aa24.52■■□□□ 1.52
COPE-204ENST00000593827 ZNF341Q9BYN7 854 aa24.52■■□□□ 1.52
COPE-204ENST00000593827 BAG3O95817 575 aa24.51■■□□□ 1.51
COPE-204ENST00000593827 IFIT2P09913 472 aaKnown RBP24.51■■□□□ 1.51
COPE-204ENST00000593827 TCP10Q12799 353 aa24.51■■□□□ 1.51
COPE-204ENST00000593827 MKRN3Q13064 507 aaKnown RBP24.51■■□□□ 1.51
COPE-204ENST00000593827 CLMNQ96JQ2 1002 aa24.51■■□□□ 1.51
COPE-204ENST00000593827 SNRKQ9NRH2 765 aa24.51■■□□□ 1.51
COPE-204ENST00000593827 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.51■■□□□ 1.51
COPE-204ENST00000593827 TSKSQ9UJT2 592 aa24.51■■□□□ 1.51
COPE-204ENST00000593827 PLCG2P16885 1265 aa24.5■■□□□ 1.51
COPE-204ENST00000593827 OTUD7BQ6GQQ9 843 aa24.5■■□□□ 1.51
COPE-204ENST00000593827 NAA16Q6N069 864 aaPredicted RBP24.5■■□□□ 1.51
COPE-204ENST00000593827 SIRT2Q8IXJ6 389 aa24.5■■□□□ 1.51
COPE-204ENST00000593827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.5■■□□□ 1.51
COPE-204ENST00000593827 NPM3O75607 178 aaKnown RBP24.49■■□□□ 1.51
COPE-204ENST00000593827 RGS3P49796 1198 aa24.49■■□□□ 1.51
COPE-204ENST00000593827 NFIAQ12857 509 aa24.49■■□□□ 1.51
COPE-204ENST00000593827 ZSCAN29Q8IWY8 852 aaPredicted RBP24.49■■□□□ 1.51
COPE-204ENST00000593827 CDAN1Q8IWY9 1227 aa24.49■■□□□ 1.51
COPE-204ENST00000593827 WRNIP1Q96S55 665 aa24.49■■□□□ 1.51
COPE-204ENST00000593827 IL1RAPL2Q9NP60 686 aa24.49■■□□□ 1.51
COPE-204ENST00000593827 TLR7Q9NYK1 1049 aaKnown RBP24.49■■□□□ 1.51
COPE-204ENST00000593827 FAM198AQ9UFP1 575 aa24.49■■□□□ 1.51
COPE-204ENST00000593827 APBB1O00213 710 aa24.48■■□□□ 1.51
COPE-204ENST00000593827 ZAP70P43403 619 aa24.48■■□□□ 1.51
COPE-204ENST00000593827 RRP1P56182 461 aaKnown RBP24.48■■□□□ 1.51
COPE-204ENST00000593827 CERS3Q8IU89 383 aa24.48■■□□□ 1.51
COPE-204ENST00000593827 ELP3Q9H9T3 547 aa24.48■■□□□ 1.51
COPE-204ENST00000593827 CYP2E1P05181 493 aaPredicted RBP24.47■■□□□ 1.51
COPE-204ENST00000593827 VGLL4Q14135 290 aa24.47■■□□□ 1.51
COPE-204ENST00000593827 TTF1Q15361 905 aaPredicted RBP24.47■■□□□ 1.51
COPE-204ENST00000593827 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.47■■□□□ 1.51
COPE-204ENST00000593827 OPTNQ96CV9 577 aa24.47■■□□□ 1.51
COPE-204ENST00000593827 WDHD1O75717 1129 aaPredicted RBP24.45■■□□□ 1.5
COPE-204ENST00000593827 GTF2A2P52657 109 aa24.45■■□□□ 1.5
COPE-204ENST00000593827 MAP3K12Q12852 859 aa24.45■■□□□ 1.5
COPE-204ENST00000593827 MIGA2Q7L4E1 593 aa24.45■■□□□ 1.5
COPE-204ENST00000593827 ERO1BQ86YB8 467 aa24.45■■□□□ 1.5
COPE-204ENST00000593827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.45■■□□□ 1.5
COPE-204ENST00000593827 LRRCC1Q9C099 1032 aa24.45■■□□□ 1.5
COPE-204ENST00000593827 RHBDL3P58872 404 aa24.44■■□□□ 1.5
COPE-204ENST00000593827 PICALMQ13492 652 aa24.44■■□□□ 1.5
COPE-204ENST00000593827 SPDYE5A6NIY4 337 aa24.43■■□□□ 1.5
COPE-204ENST00000593827 IDH1O75874 414 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms